Difference between revisions of "Ec-18 002810"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NICOTINATEPRIBOSYLTRANS-RXN NICOTINATEPRIBOSYLTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Gene == Gene Ec-18_002810 == * left end position: ** 2793032 * transcription direction: ** POSITIVE * right end position: ** 2799469 * centisome position: ** 56.6...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NICOTINATEPRIBOSYLTRANS-RXN NICOTINATEPRIBOSYLTRANS-RXN] ==
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== Gene Ec-18_002810 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2793032
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* common name:
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* transcription direction:
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** nicotinate phosphoribosyltransferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/6.3.4.21 EC-6.3.4.21]
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** 2799469
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* centisome position:
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** 56.693386   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0139_0058
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** Esi0139_0058
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** QCR
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.10.2.2-RXN]]
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** 1 [[PRPP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NIACINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[Pi]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 5-phospho-α-D-ribose 1-diphosphate[c] '''+''' 1 H2O[c] '''+''' 1 nicotinate[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 ADP[c] '''+''' 1 β-nicotinate D-ribonucleotide[c] '''+''' 1 phosphate[c]
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* Reaction: [[RXN-14107]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-15816]]
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* [[Ec-27_002350]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: ec-number
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***GO-TERM
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* Reaction: [[RXN-15829]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
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** '''5''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6692]]
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* [[PWY-7279]]
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* [[PWY-7082]]
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* [[PWY-3781]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2793032}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13393 13393]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2799469}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01724 R01724]
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{{#set: centisome position=56.693386    }}
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* UNIPROT:
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{{#set: common name=Esi_0139_0058|Esi0139_0058|QCR}}
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** [http://www.uniprot.org/uniprot/P22253 P22253]
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{{#set: reaction associated=1.10.2.2-RXN|RXN-14107|RXN-15816|RXN-15829}}
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** [http://www.uniprot.org/uniprot/P18133 P18133]
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{{#set: pathway associated=PWY-6692|PWY-7279|PWY-7082|PWY-3781}}
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** [http://www.uniprot.org/uniprot/P39683 P39683]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=nicotinate phosphoribosyltransferase}}
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{{#set: ec number=EC-6.3.4.21}}
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{{#set: gene associated=Ec-27_002350}}
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{{#set: in pathway=PYRIDNUCSAL-PWY|PWY-5381}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:27, 21 March 2018

Gene Ec-18_002810

  • left end position:
    • 2793032
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2799469
  • centisome position:
    • 56.693386
  • Synonym(s):
    • Esi_0139_0058
    • Esi0139_0058
    • QCR

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-18_002810&oldid=27051"