Difference between revisions of "RXN-37"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-37 RXN-37] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.2.1....")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-37 RXN-37] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
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** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-287987 TAX-287987]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5204 TAX-5204]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2836 TAX-2836]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4762 TAX-4762]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4890 TAX-4890]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5794 TAX-5794]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
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** chorismate biosynthesis from 3-dehydroquinate
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''6''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[2.5.1.19-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CPD-30]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[CPD-35]][c] '''+''' 1 [[NADH]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-26_000800]]
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** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 4-acetamidobutanal[c] '''=>''' 2 H+[c] '''+''' 1 4-acetamidobutanoate[c] '''+''' 1 NADH[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** [[orthology-aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
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* Gene: [[Ec-11_002450]]
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** 4 associated gene(s):
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** Source: [[orthology-aragem]]
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*** [[Ec-07_000550]]
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== Pathways  ==
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*** [[Ec-26_004120]]
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* [[PWY-0]], putrescine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-0 PWY-0]
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*** [[Ec-02_006010]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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*** [[Ec-14_005400]]
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== Reconstruction information  ==
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** 2 reconstruction source(s) associated:
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* Category: [[orthology]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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*** [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* [[CHORISMATE-SYNTHASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-11_005820]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RXN-7968]]
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** 1 associated gene(s):
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*** [[Ec-02_006010]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[SHIKIMATE-5-DEHYDROGENASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-02_006010]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[SHIKIMATE-KINASE-RXN]]
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** 2 associated gene(s):
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*** [[Ec-11_000770]]
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*** [[Ec-02_005600]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6163 PWY-6163]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31231 31231]
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{{#set: taxonomic range=TAX-2157}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-3041}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05050 R05050]
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{{#set: taxonomic range=TAX-2763}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-287987}}
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{{#set: ec number=EC-1.2.1.3}}
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{{#set: taxonomic range=TAX-5204}}
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{{#set: gene associated=Ec-11_002450}}
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{{#set: taxonomic range=TAX-2836}}
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{{#set: in pathway=PWY-0}}
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{{#set: taxonomic range=TAX-4762}}
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{{#set: reconstruction category=orthology}}
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{{#set: taxonomic range=TAX-4890}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: taxonomic range=TAX-5794}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=chorismate biosynthesis from 3-dehydroquinate}}
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{{#set: reaction found=6}}
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{{#set: total reaction=6}}
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{{#set: completion rate=100.0}}
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Latest revision as of 19:27, 21 March 2018

Reaction RXN-37

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 H2O[c] + 1 4-acetamidobutanal[c] => 2 H+[c] + 1 4-acetamidobutanoate[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-0, putrescine degradation III: PWY-0
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-37&oldid=27064"