Difference between revisions of "URKI-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8783 RXN-8783] == * direction: ** LEFT-TO-RIGHT * common name: ** Lactonase domain-containing p...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URKI-RXN URKI-RXN] == * direction: ** REVERSIBLE * common name: ** GTP:uridine 5'-phosphotransferas...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8783 RXN-8783] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URKI-RXN URKI-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Lactonase domain-containing protein
+
** GTP:uridine 5'-phosphotransferase
 +
** Phosphoribulokinase/uridine kinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.1.17 EC-3.1.1.17]
+
** [http://enzyme.expasy.org/EC/2.7.1.48 EC-2.7.1.48]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-GULONO-1-4-LACTONE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-GULONATE]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[GTP]][c] '''+''' 1 [[URIDINE]][c] '''<=>''' 1 [[UMP]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-gulono-1,4-lactone[c] '''+''' 1 H2O[c] '''=>''' 1 L-gulonate[c] '''+''' 1 H+[c]
+
** 1 GTP[c] '''+''' 1 uridine[c] '''<=>''' 1 UMP[c] '''+''' 1 GDP[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-10_002500]]
+
* Gene: [[Ec-26_002450]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Ec-21_001990]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY3DJ-35471]], L-ascorbate biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-35471 PWY3DJ-35471]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 31: Line 27:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27650 27650]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02933 R02933]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00968 R00968]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* UNIPROT:
−
{{#set: common name=Lactonase domain-containing protein}}
+
** [http://www.uniprot.org/uniprot/P0A8F4 P0A8F4]
−
{{#set: ec number=EC-3.1.1.17}}
+
** [http://www.uniprot.org/uniprot/P47622 P47622]
−
{{#set: gene associated=Ec-10_002500|Ec-21_001990}}
+
** [http://www.uniprot.org/uniprot/Q9CF21 Q9CF21]
−
{{#set: in pathway=PWY3DJ-35471}}
+
** [http://www.uniprot.org/uniprot/P44533 P44533]
 +
** [http://www.uniprot.org/uniprot/P27515 P27515]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=GTP:uridine 5'-phosphotransferase}}
 +
{{#set: common name=Phosphoribulokinase/uridine kinase}}
 +
{{#set: ec number=EC-2.7.1.48}}
 +
{{#set: gene associated=Ec-26_002450}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:28, 21 March 2018

Reaction URKI-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • GTP:uridine 5'-phosphotransferase
    • Phosphoribulokinase/uridine kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 GTP[c] + 1 uridine[c] <=> 1 UMP[c] + 1 GDP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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