Difference between revisions of "Ec-27 004830"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Gene == Gene Ec-27_004830 == * left end position: ** 4283995 * transcription direction: ** POSITIVE * right end position: ** 4288887 * centisome position: ** 66.4...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385] ==
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== Gene Ec-27_004830 ==
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* taxonomic range:
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* left end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** 4283995
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* transcription direction:
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* common name:
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** POSITIVE
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** 1,3-propanediol biosynthesis (engineered)
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* right end position:
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** 4288887
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* centisome position:
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** 66.41948   
 
* Synonym(s):
 
* Synonym(s):
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** 1,3-PDO biosynthesis
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** Esi_0000_0309
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** Esi0000_0309
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''5''' reactions found over '''9''' reactions in the full pathway
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* Reaction: [[3.1.1.64-RXN]]
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* [[1.1.1.8-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 3 associated gene(s):
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*** Assignment: automated-name-match
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*** [[Ec-27_006990]]
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* Reaction: [[CARBOXYLESTERASE-RXN]]
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*** [[Ec-19_001930]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-19_004200]]
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*** Assignment: automated-name-match
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** 1 reconstruction source(s) associated:
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* Reaction: [[RETINYL-PALMITATE-ESTERASE-RXN]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[6PFRUCTPHOS-RXN]]
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*** Assignment: automated-name-match
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** 3 associated gene(s):
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* Reaction: [[RXN-10711]]
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*** [[Ec-12_002540]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-22_000070]]
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*** Assignment: automated-name-match
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*** [[Ec-14_003880]]
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* Reaction: [[RXN-10767]]
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** 2 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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*** [[orthology-aragem]]
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* Reaction: [[RXN-12252]]
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* [[F16ALDOLASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 4 associated gene(s):
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*** Assignment: automated-name-match
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*** [[Ec-10_000880]]
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* Reaction: [[RXN-12575]]
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*** [[Ec-10_004980]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-14_001680]]
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*** Assignment: automated-name-match
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*** [[Ec-01_008040]]
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* Reaction: [[RXNQT-4366]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* [[GLUCOKIN-RXN]]
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== Pathways associated ==
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** 1 associated gene(s):
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* [[PWY-6857]]
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*** [[Ec-27_005030]]
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* [[PWY-6303]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PGLUCISOM-RXN]]
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** 3 associated gene(s):
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*** [[Ec-24_002470]]
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*** [[Ec-13_003530]]
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*** [[Ec-13_003810]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=GLYCEROL-DEHYDRATASE-RXN GLYCEROL-DEHYDRATASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14965 RXN-14965]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6487 RXN0-6487]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7077 RXN0-7077]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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{{#set: left end position=4283995}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=1,3-propanediol biosynthesis (engineered)}}
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{{#set: right end position=4288887}}
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{{#set: common name=1,3-PDO biosynthesis}}
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{{#set: centisome position=66.41948    }}
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{{#set: reaction found=5}}
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{{#set: common name=Esi_0000_0309|Esi0000_0309}}
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{{#set: total reaction=9}}
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{{#set: reaction associated=3.1.1.64-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10711|RXN-10767|RXN-12252|RXN-12575|RXNQT-4366}}
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{{#set: completion rate=56.0}}
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{{#set: pathway associated=PWY-6857|PWY-6303}}

Latest revision as of 20:28, 21 March 2018

Gene Ec-27_004830

  • left end position:
    • 4283995
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4288887
  • centisome position:
    • 66.41948
  • Synonym(s):
    • Esi_0000_0309
    • Esi0000_0309

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_004830&oldid=27174"