Difference between revisions of "Ec-27 004830"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FERREDOXIN--NITRITE-REDUCTASE-RXN FERREDOXIN--NITRITE-REDUCTASE-RXN] == * direction: ** LEFT-TO-RIG...")
(Created page with "Category:Gene == Gene Ec-27_004830 == * left end position: ** 4283995 * transcription direction: ** POSITIVE * right end position: ** 4288887 * centisome position: ** 66.4...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FERREDOXIN--NITRITE-REDUCTASE-RXN FERREDOXIN--NITRITE-REDUCTASE-RXN] ==
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== Gene Ec-27_004830 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4283995
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.7.7.1 EC-1.7.7.1]
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** POSITIVE
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* right end position:
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** 4288887
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* centisome position:
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** 66.41948   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0000_0309
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** Esi0000_0309
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.1.64-RXN]]
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** 8 [[PROTON]][c] '''+''' 1 [[NITRITE]][c] '''+''' 6 [[Reduced-ferredoxins]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 6 [[Oxidized-ferredoxins]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 8 H+[c] '''+''' 1 nitrite[c] '''+''' 6 a reduced ferredoxin [iron-sulfur] cluster[c] '''=>''' 2 H2O[c] '''+''' 1 ammonium[c] '''+''' 6 an oxidized ferredoxin [iron-sulfur] cluster[c]
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* Reaction: [[CARBOXYLESTERASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RETINYL-PALMITATE-ESTERASE-RXN]]
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* Gene: [[Ec-01_002720]]
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** Source: [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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*** Assignment: automated-name-match
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-10711]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
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*** Assignment: automated-name-match
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* Reaction: [[RXN-10767]]
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* [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3]
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** Source: [[annotation-esiliculosus_genome]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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*** Assignment: automated-name-match
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== Reconstruction information  ==
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* Reaction: [[RXN-12252]]
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* Category: [[orthology]]
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** Source: [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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*** Assignment: automated-name-match
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*** Tool: [[pantograph]]
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* Reaction: [[RXN-12575]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXNQT-4366]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-6857]]
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* [[PWY-6303]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=4283995}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00790 R00790]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=4288887}}
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{{#set: ec number=EC-1.7.7.1}}
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{{#set: centisome position=66.41948    }}
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{{#set: gene associated=Ec-01_002720}}
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{{#set: common name=Esi_0000_0309|Esi0000_0309}}
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{{#set: in pathway=PWY-381|PWY490-3}}
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{{#set: reaction associated=3.1.1.64-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10711|RXN-10767|RXN-12252|RXN-12575|RXNQT-4366}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-6857|PWY-6303}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:28, 21 March 2018

Gene Ec-27_004830

  • left end position:
    • 4283995
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4288887
  • centisome position:
    • 66.41948
  • Synonym(s):
    • Esi_0000_0309
    • Esi0000_0309

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_004830&oldid=27174"