Difference between revisions of "RXN-13617"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRIOSEPISOMERIZATION-RXN TRIOSEPISOMERIZATION-RXN] == * direction: ** REVERSIBLE * common name: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13617 RXN-13617] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRIOSEPISOMERIZATION-RXN TRIOSEPISOMERIZATION-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13617 RXN-13617] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
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** LEFT-TO-RIGHT
−
* common name:
+
−
** triose-phosphate isomerase
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−
** Triosephosphate isomerase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/5.3.1.1 EC-5.3.1.1]
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GAP]][c] '''<=>''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c]
+
** 1 [[CPD0-2123]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CPD-196]][c] '''+''' 1 [[ACETYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-glyceraldehyde 3-phosphate[c] '''<=>''' 1 glycerone phosphate[c]
+
** 1 3-oxodecanoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 octanoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-08_000500]]
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* Gene: [[Ec-26_003940]]
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** ESILICULOSUS_GENOME
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** Source: [[orthology-aragem]]
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***EC-NUMBER
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−
* [[Ec-23_004160]]
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** ESILICULOSUS_GENOME
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−
***GO-TERM
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−
* [[Ec-03_002790]]
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−
** ESILICULOSUS_GENOME
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−
***EC-NUMBER
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−
* [[Ec-24_000360]]
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−
** ESILICULOSUS_GENOME
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−
***EC-NUMBER
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−
** [[pantograph]]-[[aragem]]
+
−
** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-1042]], glycolysis IV (plant cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042]
+
* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
−
** '''8''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
* [[P341-PWY]], glycolysis V (Pyrococcus): [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7003]], glycerol degradation to butanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7003 PWY-7003]
+
−
** '''8''' reactions found over '''10''' reactions in the full pathway
+
−
* [[PWY66-373]], sucrose degradation V (sucrose &alpha;-glucosidase): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-373 PWY66-373]
+
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
−
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
+
−
** '''13''' reactions found over '''13''' reactions in the full pathway
+
−
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
+
−
** '''12''' reactions found over '''12''' reactions in the full pathway
+
−
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
+
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
+
−
** '''13''' reactions found over '''13''' reactions in the full pathway
+
−
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
+
−
** '''10''' reactions found over '''14''' reactions in the full pathway
+
−
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
+
−
** '''11''' reactions found over '''11''' reactions in the full pathway
+
−
* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY]
+
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
−
* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
+
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18585 18585]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31089 31089]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01015 R01015]
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** [http://www.genome.jp/dbget-bin/www_bget?R03778 R03778]
−
* UNIPROT:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/P19118 P19118]
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{{#set: ec number=EC-2.3.1.16}}
−
** [http://www.uniprot.org/uniprot/P21820 P21820]
+
{{#set: gene associated=Ec-26_003940}}
−
** [http://www.uniprot.org/uniprot/P48501 P48501]
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{{#set: in pathway=PWY-7094}}
−
** [http://www.uniprot.org/uniprot/P62002 P62002]
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/O27120 O27120]
+
{{#set: reconstruction source=orthology-aragem}}
−
** [http://www.uniprot.org/uniprot/P27876 P27876]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/Q9PMQ6 Q9PMQ6]
+
−
** [http://www.uniprot.org/uniprot/P19583 P19583]
+
−
** [http://www.uniprot.org/uniprot/Q9UXX2 Q9UXX2]
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−
** [http://www.uniprot.org/uniprot/P47721 P47721]
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−
** [http://www.uniprot.org/uniprot/P47670 P47670]
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−
** [http://www.uniprot.org/uniprot/P50918 P50918]
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−
** [http://www.uniprot.org/uniprot/P43727 P43727]
+
−
** [http://www.uniprot.org/uniprot/Q58923 Q58923]
+
−
** [http://www.uniprot.org/uniprot/O28965 O28965]
+
−
** [http://www.uniprot.org/uniprot/Q59182 Q59182]
+
−
** [http://www.uniprot.org/uniprot/O59536 O59536]
+
−
** [http://www.uniprot.org/uniprot/P36204 P36204]
+
−
** [http://www.uniprot.org/uniprot/Q9JW31 Q9JW31]
+
−
** [http://www.uniprot.org/uniprot/P04828 P04828]
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−
** [http://www.uniprot.org/uniprot/P00943 P00943]
+
−
** [http://www.uniprot.org/uniprot/P00942 P00942]
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−
** [http://www.uniprot.org/uniprot/P00940 P00940]
+
−
** [http://www.uniprot.org/uniprot/P60175 P60175]
+
−
** [http://www.uniprot.org/uniprot/P0A858 P0A858]
+
−
** [http://www.uniprot.org/uniprot/P60174 P60174]
+
−
** [http://www.uniprot.org/uniprot/P00941 P00941]
+
−
** [http://www.uniprot.org/uniprot/P15426 P15426]
+
−
** [http://www.uniprot.org/uniprot/P17751 P17751]
+
−
** [http://www.uniprot.org/uniprot/P00939 P00939]
+
−
** [http://www.uniprot.org/uniprot/P12863 P12863]
+
−
** [http://www.uniprot.org/uniprot/P07669 P07669]
+
−
** [http://www.uniprot.org/uniprot/P35144 P35144]
+
−
** [http://www.uniprot.org/uniprot/P48494 P48494]
+
−
** [http://www.uniprot.org/uniprot/Q7M4X7 Q7M4X7]
+
−
** [http://www.uniprot.org/uniprot/P29613 P29613]
+
−
** [http://www.uniprot.org/uniprot/P30741 P30741]
+
−
** [http://www.uniprot.org/uniprot/Q01893 Q01893]
+
−
** [http://www.uniprot.org/uniprot/P48499 P48499]
+
−
** [http://www.uniprot.org/uniprot/P48496 P48496]
+
−
** [http://www.uniprot.org/uniprot/P46226 P46226]
+
−
** [http://www.uniprot.org/uniprot/P46225 P46225]
+
−
** [http://www.uniprot.org/uniprot/P48492 P48492]
+
−
** [http://www.uniprot.org/uniprot/Q56738 Q56738]
+
−
** [http://www.uniprot.org/uniprot/Q7LZE5 Q7LZE5]
+
−
** [http://www.uniprot.org/uniprot/P46711 P46711]
+
−
** [http://www.uniprot.org/uniprot/O32757 O32757]
+
−
** [http://www.uniprot.org/uniprot/O74067 O74067]
+
−
** [http://www.uniprot.org/uniprot/P48491 P48491]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=triose-phosphate isomerase}}
+
−
{{#set: common name=Triosephosphate isomerase}}
+
−
{{#set: ec number=EC-5.3.1.1}}
+
−
{{#set: gene associated=Ec-08_000500|Ec-23_004160|Ec-03_002790|Ec-24_000360}}
+
−
{{#set: in pathway=PWY-1042|P341-PWY|PWY-7003|PWY66-373|GLUCONEO-PWY|GLYCOLYSIS|ANAGLYCOLYSIS-PWY|CALVIN-PWY|PWY-6142|PWY-5484|P185-PWY|PWY66-399}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:28, 21 March 2018

Reaction RXN-13617

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxodecanoyl-CoA[c] + 1 coenzyme A[c] => 1 octanoyl-CoA[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7094, fatty acid salvage: PWY-7094
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-13617&oldid=27190"