Difference between revisions of "RUMP-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEAMINE-DIOXYGENASE-RXN CYSTEAMINE-DIOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEAMINE-DIOXYGENASE-RXN CYSTEAMINE-DIOXYGENASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** cysteamine dioxygenase
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** formaldehyde oxidation I
* ec number:
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** [http://enzyme.expasy.org/EC/1.13.11.19 EC-1.13.11.19]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''4''' reactions found over '''6''' reactions in the full pathway
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-239]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[HYPOTAURINE]][c]
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* [[6PGLUCONOLACT-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 oxygen[c] '''+''' 1 cysteamine[c] '''=>''' 1 H+[c] '''+''' 1 hypotaurine[c]
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*** [[Ec-02_004960]]
 
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** 2 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
* [[Ec-27_003300]]
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* [[GLU6PDEHYDROG-RXN]]
** ESILICULOSUS_GENOME
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** 1 associated gene(s):
***GO-TERM
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*** [[Ec-12_007700]]
* [[Ec-23_001060]]
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** 1 reconstruction source(s) associated:
** ESILICULOSUS_GENOME
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*** [[annotation-esiliculosus_genome]]
***GO-TERM
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* [[PGLUCISOM-RXN]]
== Pathways  ==
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** 3 associated gene(s):
* [[PWY-5331]], taurine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5331 PWY-5331]
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*** [[Ec-24_002470]]
** '''2''' reactions found over '''4''' reactions in the full pathway
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*** [[Ec-13_003530]]
== Reconstruction information  ==
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*** [[Ec-13_003810]]
* [[annotation]]:
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** 1 reconstruction source(s) associated:
** [[pathwaytools]]:
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*** [[annotation-esiliculosus_genome]]
*** [[esiliculosus_genome]]
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* [[RXN-3341]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=R10-RXN R10-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R12-RXN R12-RXN]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-2}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14409 14409]
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{{#set: common name=formaldehyde oxidation I}}
* LIGAND-RXN:
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{{#set: reaction found=4}}
** [http://www.genome.jp/dbget-bin/www_bget?R02467 R02467]
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{{#set: total reaction=6}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=67.0}}
{{#set: common name=cysteamine dioxygenase}}
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{{#set: ec number=EC-1.13.11.19}}
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{{#set: gene associated=Ec-27_003300|Ec-23_001060}}
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{{#set: in pathway=PWY-5331}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:28, 21 March 2018

Pathway RUMP-PWY

  • taxonomic range:
  • common name:
    • formaldehyde oxidation I
  • Synonym(s):

Reaction(s) found

4 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links