Difference between revisions of "6PGLUCONOLACT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] == * direction: ** REVERSIBLE * common name: ** Aspartate Aminotransferase **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONOLACT-RXN 6PGLUCONOLACT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 6-Phosphogl...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONOLACT-RXN 6PGLUCONOLACT-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Aspartate Aminotransferase
+
** 6-Phosphogluconolactonase
−
** aspartate aminotransferase
+
−
** Pyridoxal phosphate-dependent transferase, major region, subdomain 1
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
+
** [http://enzyme.expasy.org/EC/3.1.1.31 EC-3.1.1.31]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-CYSTEATE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[CPD-380]][c] '''+''' 1 [[GLT]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[D-6-P-GLUCONO-DELTA-LACTONE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-2961]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-cysteate[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 3-sulfopyruvate[c] '''+''' 1 L-glutamate[c]
+
** 1 H2O[c] '''+''' 1 6-phospho D-glucono-1,5-lactone[c] '''=>''' 1 H+[c] '''+''' 1 D-gluconate 6-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-23_003500]]
+
* Gene: [[Ec-02_004960]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Ec-01_007480]]
+
** Source: [[orthology-aragem]]
−
** ESILICULOSUS_GENOME
+
** Source: [[orthology-aragem]]
−
***EC-NUMBER
+
−
* [[Ec-03_003270]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6638]], sulfolactate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6638 PWY-6638]
+
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''13''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY-6643]], coenzyme M biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6643 PWY-6643]
+
* [[RUMP-PWY]], formaldehyde oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY]
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6642]], (R)-cysteate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6642 PWY-6642]
+
* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch): [http://metacyc.org/META/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[GLYCOLYSIS-E-D]], superpathway of glycolysis and Entner-Doudoroff: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-E-D GLYCOLYSIS-E-D]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 44: Line 39:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12556 12556]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02433 R02433]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02035 R02035]
−
{{#set: direction=REVERSIBLE}}
+
* UNIPROT:
−
{{#set: common name=Aspartate Aminotransferase}}
+
** [http://www.uniprot.org/uniprot/P63337 P63337]
−
{{#set: common name=aspartate aminotransferase}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Pyridoxal phosphate-dependent transferase, major region, subdomain 1}}
+
{{#set: common name=6-Phosphogluconolactonase}}
−
{{#set: ec number=EC-2.6.1.1}}
+
{{#set: ec number=EC-3.1.1.31}}
−
{{#set: gene associated=Ec-23_003500|Ec-01_007480|Ec-03_003270}}
+
{{#set: gene associated=Ec-02_004960}}
−
{{#set: in pathway=PWY-6638|PWY-6643|PWY-6642}}
+
{{#set: in pathway=P122-PWY|RUMP-PWY|OXIDATIVEPENT-PWY|GLYCOLYSIS-E-D}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:29, 21 March 2018

Reaction 6PGLUCONOLACT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 6-Phosphogluconolactonase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P122-PWY, heterolactic fermentation: P122-PWY
    • 13 reactions found over 18 reactions in the full pathway
  • RUMP-PWY, formaldehyde oxidation I: RUMP-PWY
    • 4 reactions found over 6 reactions in the full pathway
  • OXIDATIVEPENT-PWY, pentose phosphate pathway (oxidative branch): OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • GLYCOLYSIS-E-D, superpathway of glycolysis and Entner-Doudoroff: GLYCOLYSIS-E-D
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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