Difference between revisions of "Ec-17 001590"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVP-RXN GCVP-RXN] == * direction: ** REVERSIBLE * common name: ** glycine dehydrogenase (decarboxy...")
 
(Created page with "Category:Gene == Gene Ec-17_001590 == * left end position: ** 1677514 * transcription direction: ** POSITIVE * right end position: ** 1682647 * centisome position: ** 34.9...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVP-RXN GCVP-RXN] ==
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== Gene Ec-17_001590 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 1677514
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* common name:
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* transcription direction:
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** glycine dehydrogenase (decarboxylating)
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** POSITIVE
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** Glycine dehydrogenase (decarboxylating)
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* right end position:
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* ec number:
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** 1682647
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** [http://enzyme.expasy.org/EC/1.4.4.2 EC-1.4.4.2]
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* centisome position:
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** 34.963165   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0149_0059
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** Esi0149_0059
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN0-5217]]
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** 1 [[PROTON]][c] '''+''' 1 [[GLY]][c] '''+''' 1 [[PROTEIN-LIPOYLLYSINE]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[AMINOMETHYLDIHYDROLIPOYL-GCVH]][c]
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** Source: [[orthology-aragem]]
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* With common name(s):
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* Reaction: [[SPERMIDINESYN-RXN]]
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** 1 H+[c] '''+''' 1 glycine[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine[c] '''<=>''' 1 CO2[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-aminomethyldihydrolipoyl-L-lysine[c]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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== Genes associated with this reaction  ==
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** Source: [[orthology-aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[SPERMINE-SYNTHASE-RXN]]
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* [[Ec-23_004150]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***EC-NUMBER
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== Pathways associated ==
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* [[Ec-07_004110]]
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* [[ARGSPECAT-PWY]]
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** ESILICULOSUS_GENOME
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* [[POLYAMINSYN3-PWY]]
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***GO-TERM
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* [[BSUBPOLYAMSYN-PWY]]
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== Pathways ==
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* [[PWY0-1303]]
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* [[GLYCINE-SYN2-PWY]], glycine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-SYN2-PWY GLYCINE-SYN2-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[GLYCLEAV-PWY]], glycine cleavage: [http://metacyc.org/META/NEW-IMAGE?object=GLYCLEAV-PWY GLYCLEAV-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=1677514}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03425 R03425]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: right end position=1682647}}
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** [http://www.uniprot.org/uniprot/P26969 P26969]
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{{#set: centisome position=34.963165    }}
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** [http://www.uniprot.org/uniprot/Q9UXT1 Q9UXT1]
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{{#set: common name=Esi_0149_0059|Esi0149_0059}}
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** [http://www.uniprot.org/uniprot/Q9JT86 Q9JT86]
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{{#set: reaction associated=RXN0-5217|SPERMIDINESYN-RXN|SPERMINE-SYNTHASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9UXT0 Q9UXT0]
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{{#set: pathway associated=ARGSPECAT-PWY|POLYAMINSYN3-PWY|BSUBPOLYAMSYN-PWY|PWY0-1303}}
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** [http://www.uniprot.org/uniprot/P23378 P23378]
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** [http://www.uniprot.org/uniprot/P33195 P33195]
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** [http://www.uniprot.org/uniprot/O80988 O80988]
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** [http://www.uniprot.org/uniprot/Q94B78 Q94B78]
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** [http://www.uniprot.org/uniprot/O32915 O32915]
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** [http://www.uniprot.org/uniprot/O22575 O22575]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=glycine dehydrogenase (decarboxylating)}}
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{{#set: common name=Glycine dehydrogenase (decarboxylating)}}
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{{#set: ec number=EC-1.4.4.2}}
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{{#set: gene associated=Ec-23_004150|Ec-07_004110}}
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{{#set: in pathway=GLYCINE-SYN2-PWY|GLYCLEAV-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:29, 21 March 2018

Gene Ec-17_001590

  • left end position:
    • 1677514
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1682647
  • centisome position:
    • 34.963165
  • Synonym(s):
    • Esi_0149_0059
    • Esi0149_0059

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-17_001590&oldid=27233"