Difference between revisions of "Ec-05 002900"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] == * direction: ** REVERSIBLE * common name: ** Aspartate Aminotransferase **...")
 
(Created page with "Category:Gene == Gene Ec-05_002900 == * left end position: ** 4573978 * transcription direction: ** POSITIVE * right end position: ** 4583773 * centisome position: ** 50.2...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] ==
+
== Gene Ec-05_002900 ==
−
* direction:
+
* left end position:
−
** REVERSIBLE
+
** 4573978
−
* common name:
+
* transcription direction:
−
** Aspartate Aminotransferase
+
** POSITIVE
−
** aspartate aminotransferase
+
* right end position:
−
** Pyridoxal phosphate-dependent transferase, major region, subdomain 1
+
** 4583773
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
+
** 50.24415   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0004_0228
 +
** Esi0004_0228
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[RXN-5464]]
−
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-CYSTEATE]][c] '''<=>''' 1 [[CPD-380]][c] '''+''' 1 [[GLT]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 2-oxoglutarate[c] '''+''' 1 L-cysteate[c] '''<=>''' 1 3-sulfopyruvate[c] '''+''' 1 L-glutamate[c]
+
== Pathways associated ==
−
 
+
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-03_003270]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-01_007480]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-23_003500]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[PWY-6638]], sulfolactate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6638 PWY-6638]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-6643]], coenzyme M biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6643 PWY-6643]
+
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-6642]], (R)-cysteate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6642 PWY-6642]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[aragem]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=4573978}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02433 R02433]
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: right end position=4583773}}
−
{{#set: common name=Aspartate Aminotransferase}}
+
{{#set: centisome position=50.24415    }}
−
{{#set: common name=aspartate aminotransferase}}
+
{{#set: common name=Esi_0004_0228|Esi0004_0228}}
−
{{#set: common name=Pyridoxal phosphate-dependent transferase, major region, subdomain 1}}
+
{{#set: reaction associated=RXN-5464}}
−
{{#set: ec number=EC-2.6.1.1}}
+
{{#set: pathway associated=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
−
{{#set: gene associated=Ec-03_003270|Ec-01_007480|Ec-23_003500}}
+
−
{{#set: in pathway=PWY-6638|PWY-6643|PWY-6642}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 19:29, 21 March 2018

Gene Ec-05_002900

  • left end position:
    • 4573978
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4583773
  • centisome position:
    • 50.24415
  • Synonym(s):
    • Esi_0004_0228
    • Esi0004_0228

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-05_002900&oldid=27237"