Difference between revisions of "RXN-13299"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.58-RXN 4.2.1.58-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** (3R)-3-hydroxybutanoy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13299 RXN-13299] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.58-RXN 4.2.1.58-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13299 RXN-13299] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
−
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
+
 
* Synonym(s):
 
* Synonym(s):
−
** crotonoyl-[acyl-carrier-protein] hydratase
 
−
** β-hydroxybutyryl acyl carrier protein (ACP) dehydrase
 
−
** β-hydroxybutyryl acyl carrier protein dehydrase
 
−
** enoyl acyl carrier protein hydrase
 
−
** crotonyl acyl carrier protein hydratase
 
−
** 3-hydroxybutyryl acyl carrier protein dehydratase
 
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** β-hydroxybutyryl acyl carrier  protein dehydrase
 
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** (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)
 
−
** (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Beta-3-hydroxybutyryl-ACPs]][c] '''=>''' 1 [[Crotonyl-ACPs]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[CPD-10283]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-14276]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a (3R)-3-hydroxybutanoyl-[acp][c] '''=>''' 1 a crotonyl-[acp][c] '''+''' 1 H2O[c]
+
** 1 3-oxo-behenoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 (3R)-3-hydroxy-behenoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
+
* [[PWY-7036]], very long chain fatty acid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036]
−
** '''28''' reactions found over '''31''' reactions in the full pathway
+
** '''4''' reactions found over '''16''' reactions in the full pathway
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
+
−
** '''20''' reactions found over '''31''' reactions in the full pathway
+
−
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[gap-filling]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** Tool: [[pathwaytools]]
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*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04428 R04428]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase}}
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{{#set: ec number=EC-1.1.1.330}}
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{{#set: ec number=EC-2.3.1.86}}
+
{{#set: in pathway=PWY-7036}}
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{{#set: ec number=EC-2.3.1.85}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: ec number=EC-4.2.1.59}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: common name=crotonoyl-[acyl-carrier-protein] hydratase|β-hydroxybutyryl acyl carrier protein (ACP) dehydrase|β-hydroxybutyryl acyl carrier protein dehydrase|enoyl acyl carrier protein hydrase|crotonyl acyl carrier protein hydratase|3-hydroxybutyryl acyl carrier protein dehydratase|β-hydroxybutyryl acyl carrier  protein dehydrase|(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)|(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: in pathway=PWY-5971|PWY-5994|PWY-7388}}
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{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:29, 21 March 2018

Reaction RXN-13299

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-behenoyl-CoA[c] + 1 H+[c] + 1 NADPH[c] => 1 NADP+[c] + 1 (3R)-3-hydroxy-behenoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7036, very long chain fatty acid biosynthesis II: PWY-7036
    • 4 reactions found over 16 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-13299&oldid=27250"