Difference between revisions of "CODH-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5-NUCLEOTID-RXN 5-NUCLEOTID-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5-NUCLEOTID-RXN 5-NUCLEOTID-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** 5'-nucleotidase
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** reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
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* Synonym(s):
 
* Synonym(s):
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** Wood pathway
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** acetate synthesis
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** acetyl-CoA pathway
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** carbon monoxide dehydrogenase pathway
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** carbon fixation
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** CO2 fixation
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** Ljungdahl-Wood pathway
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** Wood-Ljungdahl pathway
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** reductive acetyl CoA pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''9''' reactions in the full pathway
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** 1 [[Ribonucleoside-Monophosphates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[Ribonucleosides]][c]
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* [[1.5.1.20-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 a ribonucleoside 5'-monophosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 a ribonucleoside[c]
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*** [[Ec-03_002180]]
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*** [[Ec-08_003880]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-12_005060]]
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* [[FORMATETHFLIG-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 associated gene(s):
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*** Assignment: GO-TERM
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*** [[Ec-25_001900]]
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* Gene: [[Ec-05_000950]]
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*** [[Ec-01_009540]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-15_000820]]
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* [[METHENYLTHFCYCLOHYDRO-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 associated gene(s):
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*** Assignment: GO-TERM
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*** [[Ec-14_004070]]
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== Pathways  ==
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*** [[Ec-15_001370]]
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== Reconstruction information  ==
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** 1 reconstruction source(s) associated:
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* Category: [[annotation]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[METHYLENETHFDEHYDROG-NADP-RXN]]
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*** Tool: [[pathwaytools]]
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** 3 associated gene(s):
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*** [[Ec-15_001370]]
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*** [[Ec-14_004070]]
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*** [[Ec-07_007470]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-5061]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.7.4-RXN 1.2.7.4-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ACETYLSYNCLTH-RXN ACETYLSYNCLTH-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=FORMATE-DEHYDROGENASE-NADP+-RXN FORMATE-DEHYDROGENASE-NADP+-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=METHCOCLTH-RXN METHCOCLTH-RXN]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07297 R07297]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)}}
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** [http://www.uniprot.org/uniprot/P06196 P06196]
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{{#set: common name=Wood pathway|acetate synthesis|acetyl-CoA pathway|carbon monoxide dehydrogenase pathway|carbon fixation|CO2 fixation|Ljungdahl-Wood pathway|Wood-Ljungdahl pathway|reductive acetyl CoA pathway}}
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** [http://www.uniprot.org/uniprot/P21588 P21588]
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{{#set: reaction found=5}}
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** [http://www.uniprot.org/uniprot/O34313 O34313]
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{{#set: total reaction=9}}
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** [http://www.uniprot.org/uniprot/Q9KM44 Q9KM44]
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{{#set: completion rate=56.0}}
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** [http://www.uniprot.org/uniprot/O29385 O29385]
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** [http://www.uniprot.org/uniprot/P44569 P44569]
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** [http://www.uniprot.org/uniprot/O83142 O83142]
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** [http://www.uniprot.org/uniprot/P49902 P49902]
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** [http://www.uniprot.org/uniprot/P22848 P22848]
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** [http://www.uniprot.org/uniprot/Q05927 Q05927]
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** [http://www.uniprot.org/uniprot/P21589 P21589]
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** [http://www.uniprot.org/uniprot/P29240 P29240]
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** [http://www.uniprot.org/uniprot/P07024 P07024]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=5'-nucleotidase}}
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{{#set: ec number=EC-3.1.3.5}}
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{{#set: gene associated=Ec-12_005060|Ec-05_000950|Ec-15_000820}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:29, 21 March 2018

Pathway CODH-PWY

  • taxonomic range:
  • common name:
    • reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
  • Synonym(s):
    • Wood pathway
    • acetate synthesis
    • acetyl-CoA pathway
    • carbon monoxide dehydrogenase pathway
    • carbon fixation
    • CO2 fixation
    • Ljungdahl-Wood pathway
    • Wood-Ljungdahl pathway
    • reductive acetyl CoA pathway

Reaction(s) found

5 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CODH-PWY&oldid=27266"