Difference between revisions of "Ec-02 001230"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12399 RXN-12399] == * direction: ** LEFT-TO-RIGHT * common name: ** xyloglucan XLXG oligosaccha...")
(Created page with "Category:Gene == Gene Ec-02_001230 == * left end position: ** 1551758 * transcription direction: ** POSITIVE * right end position: ** 1557507 * centisome position: ** 23.7...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12399 RXN-12399] ==
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== Gene Ec-02_001230 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1551758
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* common name:
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* transcription direction:
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** xyloglucan XLXG oligosaccharide β-galactosidase
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** POSITIVE
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** Glycoside hydrolase-type carbohydrate-binding, subgroup
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* right end position:
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** Beta-galactosidase, family GH2
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** 1557507
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23]
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** 23.771563   
 
* Synonym(s):
 
* Synonym(s):
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** Pyridoxine kinase
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** Esi_0438_0007
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PNKIN-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-13377]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[CPD-13375]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 XLXG xyloglucan oligosaccharide[c] '''=>''' 1 D-galactopyranose[c] '''+''' 1 XXXG xyloglucan oligosaccharide[c]
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** Source: [[orthology-aragem]]
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* Reaction: [[PYRAMKIN-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Ec-06_001410]]
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** Source: [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* Reaction: [[PYRIDOXKIN-RXN]]
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***EC-NUMBER
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* [[Ec-12_007000]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-7204]]
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* [[PWY-7282]]
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* [[PLPSAL-PWY]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=1551758}}
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{{#set: common name=xyloglucan XLXG oligosaccharide β-galactosidase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Glycoside hydrolase-type carbohydrate-binding, subgroup}}
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{{#set: right end position=1557507}}
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{{#set: common name=Beta-galactosidase, family GH2}}
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{{#set: centisome position=23.771563    }}
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{{#set: ec number=EC-3.2.1.23}}
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{{#set: common name=Pyridoxine kinase|Esi_0438_0007}}
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{{#set: gene associated=Ec-06_001410|Ec-12_007000}}
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{{#set: reaction associated=PNKIN-RXN|PYRAMKIN-RXN|PYRIDOXKIN-RXN}}
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{{#set: in pathway=PWY-6807}}
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{{#set: pathway associated=PWY-7204|PWY-7282|PLPSAL-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:30, 21 March 2018

Gene Ec-02_001230

  • left end position:
    • 1551758
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1557507
  • centisome position:
    • 23.771563
  • Synonym(s):
    • Pyridoxine kinase
    • Esi_0438_0007

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-02_001230&oldid=27387"