Difference between revisions of "RXN-12978"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5525 PWY-5525] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-77...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12978 RXN-12978] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-CoA synthet...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5525 PWY-5525] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12978 RXN-12978] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-7742]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** D-glucuronate degradation I
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** long chain acyl-CoA synthetase
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** long chain acyl-coA synthetase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
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** pentose pathway
 
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** glucuronic acid oxidation pathway
 
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** glucuronate/xylulose pathway
 
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** glucuronate degradation
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[RXN-14693]]
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** 1 [[5Z8Z11Z14Z17Z-EICOSAPENTAENOATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-14018]][c] '''+''' 1 [[PPI]][c]
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** 0 associated gene:
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* With common name(s):
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** 1 reconstruction source(s) associated:
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** 1 icosapentaenoate[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 AMP[c] '''+''' 1 icosapentaenoyl-CoA[c] '''+''' 1 diphosphate[c]
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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== Genes associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=DEHYDRO-L-GULONATE-DECARBOXYLASE-RXN DEHYDRO-L-GULONATE-DECARBOXYLASE-RXN]
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUCURONATE-REDUCTASE-RXN GLUCURONATE-REDUCTASE-RXN]
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* Gene: [[Ec-01_001560]]
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* [http://metacyc.org/META/NEW-IMAGE?object=L-GULONATE-3-DEHYDROGENASE-RXN L-GULONATE-3-DEHYDROGENASE-RXN]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=L-XYLULOSE-REDUCTASE-RXN L-XYLULOSE-REDUCTASE-RXN]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-12_008720]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-02_006430]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-03_003710]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-7742}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=D-glucuronate degradation I}}
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{{#set: common name=long chain acyl-CoA synthetase}}
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{{#set: common name=pentose pathway|glucuronic acid oxidation pathway|glucuronate/xylulose pathway|glucuronate degradation}}
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{{#set: common name=long chain acyl-coA synthetase}}
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{{#set: reaction found=1}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: total reaction=5}}
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{{#set: gene associated=Ec-01_001560|Ec-12_008720|Ec-02_006430|Ec-03_003710}}
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{{#set: completion rate=20.0}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:30, 21 March 2018

Reaction RXN-12978

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long chain acyl-CoA synthetase
    • long chain acyl-coA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-12978&oldid=27391"