Difference between revisions of "RXN-12978"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CIT CIT] == * smiles: ** C(=O)([O-])CC(C(=O)[O-])(O)CC(=O)[O-] * inchi key: ** InChIKey=KRKNYBC...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12978 RXN-12978] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-CoA synthet...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CIT CIT] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12978 RXN-12978] ==
−
* smiles:
+
* direction:
−
** C(=O)([O-])CC(C(=O)[O-])(O)CC(=O)[O-]
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=KRKNYBCHXYNGOX-UHFFFAOYSA-K
+
 
* common name:
 
* common name:
−
** citrate
+
** long chain acyl-CoA synthetase
−
* molecular weight:
+
** long chain acyl-coA synthetase
−
** 189.101   
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
−
** citr
 
−
** cit
 
−
** citric acid
 
−
** 2-hydroxy-1,2,3-propanetricarboxylic acid
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[ATP-CITRATE-PRO-S--LYASE-RXN]]
+
* With identifiers:
−
* [[biomass_rxn]]
+
** 1 [[5Z8Z11Z14Z17Z-EICOSAPENTAENOATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-14018]][c] '''+''' 1 [[PPI]][c]
−
== Reaction(s) known to produce the compound ==
+
* With common name(s):
−
* [[CITSYN-RXN]]
+
** 1 icosapentaenoate[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 AMP[c] '''+''' 1 icosapentaenoyl-CoA[c] '''+''' 1 diphosphate[c]
−
== Reaction(s) of unknown directionality ==
+
 
−
* [[RXN-14047]]
+
== Genes associated with this reaction  ==
−
* [[ACONITATEDEHYDR-RXN]]
+
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-01_001560]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-12_008720]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-02_006430]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-03_003710]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* CAS : 77-92-9
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* BIGG : 34080
+
{{#set: common name=long chain acyl-CoA synthetase}}
−
* PUBCHEM:
+
{{#set: common name=long chain acyl-coA synthetase}}
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=31348 31348]
+
{{#set: ec number=EC-6.2.1.3}}
−
* KNAPSACK : C00007619
+
{{#set: gene associated=Ec-01_001560|Ec-12_008720|Ec-02_006430|Ec-03_003710}}
−
* HMDB : HMDB00094
+
{{#set: in pathway=}}
−
* LIGAND-CPD:
+
{{#set: reconstruction category=annotation}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C00158 C00158]
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
* CHEMSPIDER:
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.chemspider.com/Chemical-Structure.29081.html 29081]
+
−
* CHEBI:
+
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16947 16947]
+
−
* METABOLIGHTS : MTBLC16947
+
−
{{#set: smiles=C(=O)([O-])CC(C(=O)[O-])(O)CC(=O)[O-]}}
+
−
{{#set: inchi key=InChIKey=KRKNYBCHXYNGOX-UHFFFAOYSA-K}}
+
−
{{#set: common name=citrate}}
+
−
{{#set: molecular weight=189.101    }}
+
−
{{#set: common name=citr|cit|citric acid|2-hydroxy-1,2,3-propanetricarboxylic acid}}
+
−
{{#set: consumed by=ATP-CITRATE-PRO-S--LYASE-RXN|biomass_rxn}}
+
−
{{#set: produced by=CITSYN-RXN}}
+
−
{{#set: consumed or produced by=RXN-14047|ACONITATEDEHYDR-RXN}}
+

Latest revision as of 20:30, 21 March 2018

Reaction RXN-12978

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long chain acyl-CoA synthetase
    • long chain acyl-coA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-12978&oldid=27391"