Difference between revisions of "PMPOXI-RXN"

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(Created page with "Category:Gene == Gene Ec-07_006780 == * left end position: ** 6516750 * transcription direction: ** NEGATIVE * right end position: ** 6518310 * centisome position: ** 84.3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PMPOXI-RXN PMPOXI-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyridoxamine-phosphate ox...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-07_006780 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PMPOXI-RXN PMPOXI-RXN] ==
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* left end position:
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* direction:
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** 6516750
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** pyridoxamine-phosphate oxidase
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* right end position:
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* ec number:
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** 6518310
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** [http://enzyme.expasy.org/EC/1.4.3.5 EC-1.4.3.5]
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* centisome position:
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** 84.3873   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0110_0096
 
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** Esi0110_0096
 
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** GLYRS
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[GLYCINE--TRNA-LIGASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PYRIDOXAMINE-5P]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[AMMONIUM]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 H2O[c] '''+''' 1 oxygen[c] '''+''' 1 pyridoxamine 5'-phosphate[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 pyridoxal 5'-phosphate[c] '''+''' 1 ammonium[c]
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* [[TRNA-CHARGING-PWY]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-09_002030]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-01_000340]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-10_006030]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways ==
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* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=6516750}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15817 15817]
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{{#set: right end position=6518310}}
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* LIGAND-RXN:
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{{#set: centisome position=84.3873    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00277 R00277]
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{{#set: common name=Esi_0110_0096|Esi0110_0096|GLYRS}}
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* UNIPROT:
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{{#set: reaction associated=GLYCINE--TRNA-LIGASE-RXN}}
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** [http://www.uniprot.org/uniprot/P0AFI7 P0AFI7]
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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** [http://www.uniprot.org/uniprot/Q9JTZ1 Q9JTZ1]
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** [http://www.uniprot.org/uniprot/P44909 P44909]
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** [http://www.uniprot.org/uniprot/P38075 P38075]
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** [http://www.uniprot.org/uniprot/P74211 P74211]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyridoxamine-phosphate oxidase}}
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{{#set: ec number=EC-1.4.3.5}}
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{{#set: gene associated=Ec-09_002030|Ec-01_000340|Ec-10_006030}}
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{{#set: in pathway=PWY-7204|PLPSAL-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:30, 21 March 2018

Reaction PMPOXI-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pyridoxamine-phosphate oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7204, pyridoxal 5'-phosphate salvage II (plants): PWY-7204
    • 5 reactions found over 9 reactions in the full pathway
  • PLPSAL-PWY, pyridoxal 5'-phosphate salvage I: PLPSAL-PWY
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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