Difference between revisions of "RXNN-404"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6948 PWY-6948] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNN-404 RXNN-404] == * direction: ** LEFT-TO-RIGHT * common name: ** Amidase * ec number: ** [http...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6948 PWY-6948] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNN-404 RXNN-404] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** sitosterol degradation to androstenedione
+
** Amidase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.5.1.4 EC-3.5.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
* '''1''' reaction(s) found
+
* With identifiers:
−
** [[RXN-12789]]
+
** 1 [[WATER]][c] '''+''' 1 [[CPD-237]][c] '''=>''' 1 [[INDOLE_ACETATE_AUXIN]][c] '''+''' 1 [[AMMONIUM]][c]
−
== Reaction(s) not found ==
+
* With common name(s):
−
* '''17''' reaction(s) not found
+
** 1 H2O[c] '''+''' 1 indole-3-acetamide[c] '''=>''' 1 indole-3-acetate[c] '''+''' 1 ammonium[c]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12782 RXN-12782]
+
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12790 RXN-12790]
+
== Genes associated with this reaction  ==
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12780 RXN-12780]
+
Genes have been associated with this reaction based on different elements listed below.
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12781 RXN-12781]
+
* Gene: [[Ec-02_005910]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12786 RXN-12786]
+
** Source: [[annotation-esiliculosus_genome]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12787 RXN-12787]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12784 RXN-12784]
+
* Gene: [[Ec-06_009020]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12785 RXN-12785]
+
** Source: [[annotation-esiliculosus_genome]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12788 RXN-12788]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12708 RXN-12708]
+
== Pathways  ==
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12744 RXN-12744]
+
* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12709 RXN-12709]
+
** '''2''' reactions found over '''14''' reactions in the full pathway
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12743 RXN-12743]
+
* [[PWY-5025]], indole-3-acetate biosynthesis IV (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5025 PWY-5025]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12710 RXN-12710]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12745 RXN-12745]
+
* [[PWY-3161]], indole-3-acetate biosynthesis III (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3161 PWY-3161]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12706 RXN-12706]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12707 RXN-12707]
+
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2}}
+
* RHEA:
−
{{#set: common name=sitosterol degradation to androstenedione}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34371 34371]
−
{{#set: reaction found=1}}
+
* LIGAND-RXN:
−
{{#set: reaction not found=17}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03096 R03096]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Amidase}}
 +
{{#set: ec number=EC-3.5.1.4}}
 +
{{#set: gene associated=Ec-02_005910|Ec-06_009020}}
 +
{{#set: in pathway=PWY-581|PWY-5025|PWY-3161}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:30, 21 March 2018

Reaction RXNN-404

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Amidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-581, indole-3-acetate biosynthesis II: PWY-581
    • 2 reactions found over 14 reactions in the full pathway
  • PWY-5025, indole-3-acetate biosynthesis IV (bacteria): PWY-5025
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-3161, indole-3-acetate biosynthesis III (bacteria): PWY-3161
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXNN-404&oldid=27400"