Difference between revisions of "PWY-581"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12978 RXN-12978] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-CoA synthet...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-330...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12978 RXN-12978] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
−
** long chain acyl-CoA synthetase
+
** indole-3-acetate biosynthesis II
−
** long chain acyl-coA synthetase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** auxin biosynthesis
 +
** indole-3-acetic acid biosynthesis
 +
** IAA de novo synthesis
 +
** IAA biosynthesis II
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''2''' reactions found over '''14''' reactions in the full pathway
−
** 1 [[ATP]][c] '''+''' 1 [[5Z8Z11Z14Z17Z-EICOSAPENTAENOATE]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CPD-14018]][c]
+
* [[RXN-1404]]
−
* With common name(s):
+
** 2 associated gene(s):
−
** 1 ATP[c] '''+''' 1 icosapentaenoate[c] '''+''' 1 coenzyme A[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 icosapentaenoyl-CoA[c]
+
*** [[Ec-01_002370]]
−
 
+
*** [[Ec-26_000350]]
−
== Genes associated with this reaction  ==
+
** 1 reconstruction source(s) associated:
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-aragem]]
−
* [[Ec-03_003710]]
+
* [[RXNN-404]]
−
** ESILICULOSUS_GENOME
+
** 2 associated gene(s):
−
***AUTOMATED-NAME-MATCH
+
*** [[Ec-02_005910]]
−
* [[Ec-02_006430]]
+
*** [[Ec-06_009020]]
−
** ESILICULOSUS_GENOME
+
** 1 reconstruction source(s) associated:
−
***AUTOMATED-NAME-MATCH
+
*** [[annotation-esiliculosus_genome]]
−
* [[Ec-12_008720]]
+
== Reaction(s) not found ==
−
** ESILICULOSUS_GENOME
+
* [http://metacyc.org/META/NEW-IMAGE?object=AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN]
−
***AUTOMATED-NAME-MATCH
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10139 RXN-10139]
−
* [[Ec-01_001560]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12061 RXN-12061]
−
** ESILICULOSUS_GENOME
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12062 RXN-12062]
−
***AUTOMATED-NAME-MATCH
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12063 RXN-12063]
−
== Pathways  ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12064 RXN-12064]
−
== Reconstruction information  ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1403 RXN-1403]
−
* Category: [[annotation]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1405 RXN-1405]
−
** Source: [[annotation-esiliculosus_genome]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1406 RXN-1406]
−
*** Tool: [[pathwaytools]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7567 RXN-7567]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXNDQC-2 RXNDQC-2]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=TRYPTOPHAN-AMINOTRANSFERASE-RXN TRYPTOPHAN-AMINOTRANSFERASE-RXN]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* PLANTCYC : PWY-581
−
{{#set: common name=long chain acyl-CoA synthetase}}
+
* ARACYC:
−
{{#set: common name=long chain acyl-coA synthetase}}
+
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-581 PWY-581]
−
{{#set: ec number=EC-6.2.1.3}}
+
{{#set: taxonomic range=TAX-33090}}
−
{{#set: gene associated=Ec-03_003710|Ec-02_006430|Ec-12_008720|Ec-01_001560}}
+
{{#set: common name=indole-3-acetate biosynthesis II}}
−
{{#set: in pathway=}}
+
{{#set: common name=auxin biosynthesis|indole-3-acetic acid biosynthesis|IAA de novo synthesis|IAA biosynthesis II}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reaction found=2}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: total reaction=14}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: completion rate=14.0}}

Latest revision as of 20:30, 21 March 2018

Pathway PWY-581

  • taxonomic range:
  • common name:
    • indole-3-acetate biosynthesis II
  • Synonym(s):
    • auxin biosynthesis
    • indole-3-acetic acid biosynthesis
    • IAA de novo synthesis
    • IAA biosynthesis II

Reaction(s) found

2 reactions found over 14 reactions in the full pathway

Reaction(s) not found

External links

  • PLANTCYC : PWY-581
  • ARACYC:




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-581&oldid=27421"