Difference between revisions of "RXN-11501"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATE-DEHYDROGENASE-NADP+-RXN PREPHENATE-DEHYDROGENASE-NADP+-RXN] == * direction: ** REVERSIBL...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11501 RXN-11501] == * direction: ** LEFT-TO-RIGHT * common name: ** Alpha-galactosidase, family...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATE-DEHYDROGENASE-NADP+-RXN PREPHENATE-DEHYDROGENASE-NADP+-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11501 RXN-11501] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** Alpha-galactosidase, family GH36
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.1.13 EC-1.3.1.13]
+
** [http://enzyme.expasy.org/EC/3.2.1.22 EC-3.2.1.22]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADP]][c] '''+''' 1 [[PREPHENATE]][c] '''<=>''' 1 [[P-HYDROXY-PHENYLPYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADPH]][c]
+
** 1 [[CPD-170]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-1099]][c] '''+''' 1 [[ALPHA-D-GALACTOSE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADP+[c] '''+''' 1 prephenate[c] '''<=>''' 1 4-hydroxyphenylpyruvate[c] '''+''' 1 CO2[c] '''+''' 1 NADPH[c]
+
** 1 stachyose[c] '''+''' 1 H2O[c] '''=>''' 1 raffinose[c] '''+''' 1 &alpha;-D-galactose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-17_000840]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-26_006290]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[gap-filling]]
+
* Category: [[annotation]]
−
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[meneco]]
+
*** Tool: [[pathwaytools]]
−
**** Comment: [[added for gapfilling]]
+
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01730 R01730]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03634 R03634]
−
* UNIPROT:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/P20049 P20049]
+
{{#set: common name=Alpha-galactosidase, family GH36}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: ec number=EC-3.2.1.22}}
−
{{#set: ec number=EC-1.3.1.13}}
+
{{#set: gene associated=Ec-17_000840|Ec-26_006290}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-6527}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=added for gapfilling}}
+

Latest revision as of 19:30, 21 March 2018

Reaction RXN-11501

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Alpha-galactosidase, family GH36
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6527, stachyose degradation: PWY-6527
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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