Difference between revisions of "Ec-12 005560"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOTHENATE-KIN-RXN PANTOTHENATE-KIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** panto...")
(Created page with "Category:Gene == Gene Ec-12_005560 == * left end position: ** 5059120 * transcription direction: ** POSITIVE * right end position: ** 5065454 * centisome position: ** 60.6...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOTHENATE-KIN-RXN PANTOTHENATE-KIN-RXN] ==
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== Gene Ec-12_005560 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5059120
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* common name:
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* transcription direction:
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** pantothenate kinase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.1.33 EC-2.7.1.33]
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** 5065454
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* centisome position:
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** 60.68964   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0081_0028
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** Esi0081_0028
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** BCAT3
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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** 1 [[PANTOTHENATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[4-P-PANTOTHENATE]][c] '''+''' 1 [[PROTON]][c]
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* With common name(s):
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** 1 (R)-pantothenate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 (R)-4'-phosphopantothenate[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-11_006230]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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*** Assignment: go-term
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* Gene: [[Ec-01_003730]]
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* Reaction: [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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*** Assignment: go-term
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== Pathways  ==
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* Reaction: [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
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* [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-3961]], phosphopantothenate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3961 PWY-3961]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[COA-PWY-1]], coenzyme A biosynthesis II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY-1 COA-PWY-1]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-5076]]
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* [[ILEUSYN-PWY]]
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* [[ILEUDEG-PWY]]
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* [[LEU-DEG2-PWY]]
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* [[VALDEG-PWY]]
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* [[PWY-5057]]
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* [[VALSYN-PWY]]
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* [[PWY-7767]]
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* [[PWY-5108]]
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* [[LEUSYN-PWY]]
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* [[PWY-5103]]
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* [[PWY-5101]]
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* [[PWY-5078]]
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* [[ALANINE-VALINESYN-PWY]]
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* [[PWY-5104]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5059120}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16373 16373]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5065454}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03018 R03018]
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{{#set: centisome position=60.68964    }}
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* UNIPROT:
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{{#set: common name=Esi_0081_0028|Esi0081_0028|BCAT3}}
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** [http://www.uniprot.org/uniprot/P0A6I3 P0A6I3]
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{{#set: reaction associated=BRANCHED-CHAINAMINOTRANSFERILEU-RXN|BRANCHED-CHAINAMINOTRANSFERLEU-RXN|BRANCHED-CHAINAMINOTRANSFERVAL-RXN}}
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** [http://www.uniprot.org/uniprot/Q9CFM3 Q9CFM3]
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{{#set: pathway associated=PWY-5076|ILEUSYN-PWY|ILEUDEG-PWY|LEU-DEG2-PWY|VALDEG-PWY|PWY-5057|VALSYN-PWY|PWY-7767|PWY-5108|LEUSYN-PWY|PWY-5103|PWY-5101|PWY-5078|ALANINE-VALINESYN-PWY|PWY-5104}}
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** [http://www.uniprot.org/uniprot/P44793 P44793]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pantothenate kinase}}
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{{#set: ec number=EC-2.7.1.33}}
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{{#set: gene associated=Ec-11_006230|Ec-01_003730}}
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{{#set: in pathway=PANTO-PWY|PWY-3961|COA-PWY-1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:31, 21 March 2018

Gene Ec-12_005560

  • left end position:
    • 5059120
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5065454
  • centisome position:
    • 60.68964
  • Synonym(s):
    • Esi_0081_0028
    • Esi0081_0028
    • BCAT3

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_005560&oldid=27461"