Difference between revisions of "Ec-21 003380"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.9.3-RXN 2.7.9.3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** AIR synthase-related pr...")
(Created page with "Category:Gene == Gene Ec-21_003380 == * left end position: ** 4347717 * transcription direction: ** NEGATIVE * right end position: ** 4352080 * centisome position: ** 58.9...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.9.3-RXN 2.7.9.3-RXN] ==
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== Gene Ec-21_003380 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4347717
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* common name:
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* transcription direction:
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** AIR synthase-related protein, C-terminal domain
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.9.3 EC-2.7.9.3]
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** 4352080
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* centisome position:
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** 58.911205   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0072_0054
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** Esi0072_0054
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** GRX
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DISULFOXRED-RXN]]
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** 1 [[SE-2]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[SEPO3]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[AMP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 selenide[c] '''+''' 1 H2O[c] '''+''' 1 ATP[c] '''=>''' 1 selenophosphate[c] '''+''' 1 phosphate[c] '''+''' 1 AMP[c]
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* Reaction: [[RXN-982]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-01_005250]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY0-901]], L-selenocysteine biosynthesis I (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-901 PWY0-901]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-4621]]
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* [[PWY-4202]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4347717}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18737 18737]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4352080}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03595 R03595]
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{{#set: centisome position=58.911205    }}
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* UNIPROT:
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{{#set: common name=Esi_0072_0054|Esi0072_0054|GRX}}
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** [http://www.uniprot.org/uniprot/Q9PMF9 Q9PMF9]
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{{#set: reaction associated=DISULFOXRED-RXN|RXN-982}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=PWY-4621|PWY-4202}}
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{{#set: common name=AIR synthase-related protein, C-terminal domain}}
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{{#set: ec number=EC-2.7.9.3}}
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{{#set: gene associated=Ec-01_005250}}
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{{#set: in pathway=PWY0-901|PWY-6281}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:31, 21 March 2018

Gene Ec-21_003380

  • left end position:
    • 4347717
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4352080
  • centisome position:
    • 58.911205
  • Synonym(s):
    • Esi_0072_0054
    • Esi0072_0054
    • GRX

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_003380&oldid=27481"