Difference between revisions of "PWY-5035"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.9.3-RXN 2.7.9.3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** AIR synthase-related pr...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5035 PWY-5035] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58023 TAX-5...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.9.3-RXN 2.7.9.3-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5035 PWY-5035] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58023 TAX-58023]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3195 TAX-3195]
 
* common name:
 
* common name:
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** AIR synthase-related protein, C-terminal domain
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** gibberellin biosynthesis III (early C-13 hydroxylation)
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.9.3 EC-2.7.9.3]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''7''' reactions in the full pathway
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** 1 [[SE-2]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[SEPO3]][c] '''+''' 1 [[AMP]][c]
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* [[RXN1F-167]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 selenide[c] '''+''' 1 H2O[c] '''+''' 1 ATP[c] '''=>''' 1 phosphate[c] '''+''' 1 selenophosphate[c] '''+''' 1 AMP[c]
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*** [[Ec-19_002750]]
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*** [[Ec-08_003510]]
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== Genes associated with this reaction  ==
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*** [[Ec-19_002760]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* [[Ec-01_005250]]
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*** [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* [[RXN1F-168]]
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***EC-NUMBER
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** 3 associated gene(s):
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== Pathways  ==
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*** [[Ec-08_003510]]
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* [[PWY0-901]], L-selenocysteine biosynthesis I (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-901 PWY0-901]
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*** [[Ec-19_002750]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** [[Ec-19_002760]]
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* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281]
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** 1 reconstruction source(s) associated:
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** [[orthology-aragem]]
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== Reconstruction information  ==
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== Reaction(s) not found ==
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* [[annotation]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6524 RXN-6524]
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** [[pathwaytools]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-101 RXN1F-101]
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*** [[esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-143 RXN1F-143]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-169 RXN1F-169]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-170 RXN1F-170]
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ARACYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18737 18737]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5035 PWY-5035]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-58023}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03595 R03595]
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{{#set: taxonomic range=TAX-3195}}
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* UNIPROT:
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{{#set: common name=gibberellin biosynthesis III (early C-13 hydroxylation)}}
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** [http://www.uniprot.org/uniprot/Q9PMF9 Q9PMF9]
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{{#set: reaction found=2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=7}}
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{{#set: common name=AIR synthase-related protein, C-terminal domain}}
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{{#set: completion rate=29.0}}
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{{#set: ec number=EC-2.7.9.3}}
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{{#set: gene associated=Ec-01_005250}}
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{{#set: in pathway=PWY0-901|PWY-6281}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:31, 21 March 2018

Pathway PWY-5035

  • taxonomic range:
  • common name:
    • gibberellin biosynthesis III (early C-13 hydroxylation)
  • Synonym(s):

Reaction(s) found

2 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-5035&oldid=27504"