Difference between revisions of "LINOLENOYL-RXN"

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(Created page with "Category:Gene == Gene Ec-06_000980 == * left end position: ** 653832 * transcription direction: ** NEGATIVE * right end position: ** 654080 * centisome position: ** 7.4657...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLENOYL-RXN LINOLENOYL-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-c...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-06_000980 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLENOYL-RXN LINOLENOYL-RXN] ==
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* left end position:
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* direction:
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** 653832
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** long chain acyl-coA synthetase
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* right end position:
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** long chain acyl-CoA synthetase
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** 654080
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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** 7.4657464   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0279_0007
 
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** Esi0279_0007
 
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** MTR, N-term
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[HOMOCYSMETB12-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[LINOLENIC_ACID]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[LINOLENOYL-COA]][c] '''+''' 1 [[PPI]][c]
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***ec-number
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* With common name(s):
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* [[HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN]]
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** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 α-linolenate[c] '''=>''' 1 AMP[c] '''+''' 1 α-linolenoyl-CoA[c] '''+''' 1 diphosphate[c]
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** esiliculosus_genome
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***go-term
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== Genes associated with this reaction  ==
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* [[MMUM-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** esiliculosus_genome
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* Gene: [[Ec-02_006430]]
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***automated-name-match
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** Source: [[annotation-esiliculosus_genome]]
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== Pathways associated ==
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PWY-3841]]
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* Gene: [[Ec-12_008720]]
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* [[ADENOSYLHOMOCYSCAT-PWY]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[1CMET2-PWY]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[HOMOSER-METSYN-PWY]]
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* Gene: [[Ec-01_001560]]
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* [[HSERMETANA-PWY]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-5441]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PWY-702]]
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* Gene: [[Ec-03_003710]]
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* [[PWY-2201]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-7049]], icosapentaenoate biosynthesis II (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7049 PWY-7049]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=653832}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=long chain acyl-coA synthetase}}
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{{#set: right end position=654080}}
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{{#set: common name=long chain acyl-CoA synthetase}}
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{{#set: centisome position=7.4657464    }}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: common name=Esi_0279_0007|Esi0279_0007|MTR, N-term}}
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{{#set: gene associated=Ec-02_006430|Ec-12_008720|Ec-01_001560|Ec-03_003710}}
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{{#set: reaction associated=HOMOCYSMETB12-RXN|HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN|MMUM-RXN}}
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{{#set: in pathway=PWY-7049|PWY-7724}}
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{{#set: pathway associated=PWY-3841|ADENOSYLHOMOCYSCAT-PWY|1CMET2-PWY|HOMOSER-METSYN-PWY|HSERMETANA-PWY|PWY-5441|PWY-702|PWY-2201}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:31, 21 March 2018

Reaction LINOLENOYL-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long chain acyl-coA synthetase
    • long chain acyl-CoA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 ATP[c] + 1 α-linolenate[c] => 1 AMP[c] + 1 α-linolenoyl-CoA[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7049, icosapentaenoate biosynthesis II (6-desaturase, mammals): PWY-7049
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7724, icosapentaenoate biosynthesis III (8-desaturase, mammals): PWY-7724
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=LINOLENOYL-RXN&oldid=27520"