Difference between revisions of "HOMOCYSMET-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-24_002470 == * left end position: ** 2787402 * transcription direction: ** POSITIVE * right end position: ** 2799009 * centisome position: ** 55.8...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMET-RXN HOMOCYSMET-RXN] == * direction: ** REVERSIBLE * common name: ** 5-methyltetrahydropt...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-24_002470 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMET-RXN HOMOCYSMET-RXN] ==
−
* left end position:
+
* direction:
−
** 2787402
+
** REVERSIBLE
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
−
* right end position:
+
** Methionine synthase
−
** 2799009
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/2.1.1.14 EC-2.1.1.14]
−
** 55.885834   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0060_0128
 
−
** Esi0060_0128
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[PGLUCISOM-RXN]]
+
* With identifiers:
 +
** 1 [[CPD-1302]][c] '''+''' 1 [[HOMO-CYS]][c] '''<=>''' 1 [[CPD-1301]][c] '''+''' 1 [[MET]][c]
 +
* With common name(s):
 +
** 1 N5-methyl--tetrahydropteroyl tri-L-glutamate[c] '''+''' 1 L-homocysteine[c] '''<=>''' 1 tetrahydropteroyl tri-L-glutamate[c] '''+''' 1 L-methionine[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-06_000970]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-28_003190]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 +
== Pathways  ==
 +
* [[PWY-702]], L-methionine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-702 PWY-702]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6151]], S-adenosyl-L-methionine cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6151 PWY-6151]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[HSERMETANA-PWY]], L-methionine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=HSERMETANA-PWY HSERMETANA-PWY]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5041]], S-adenosyl-L-methionine cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: go-term
+
*** Tool: [[pathwaytools]]
−
== Pathways associated ==
+
−
* [[RUMP-PWY]]
+
−
* [[GLYCOLYSIS]]
+
−
* [[PWY-3801]]
+
−
* [[PWY-7385]]
+
−
* [[P124-PWY]]
+
−
* [[ANAGLYCOLYSIS-PWY]]
+
−
* [[PWY-5659]]
+
−
* [[PWY-6981]]
+
−
* [[P341-PWY]]
+
−
* [[PWY-5384]]
+
−
* [[PWY-7347]]
+
−
* [[PWY66-399]]
+
−
* [[SUCSYN-PWY]]
+
−
* [[UDPNAGSYN-PWY]]
+
−
* [[PWY-621]]
+
−
* [[PWY-622]]
+
−
* [[PWY-5054]]
+
−
* [[PWY-6992]]
+
−
* [[PWY-6142]]
+
−
* [[GLUCONEO-PWY]]
+
−
* [[PWY-7238]]
+
−
* [[PWY-5514]]
+
−
* [[P122-PWY]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=2787402}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21196 21196]
−
{{#set: right end position=2799009}}
+
* LIGAND-RXN:
−
{{#set: centisome position=55.885834    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04405 R04405]
−
{{#set: common name=Esi_0060_0128|Esi0060_0128}}
+
* UNIPROT:
−
{{#set: reaction associated=PGLUCISOM-RXN}}
+
** [http://www.uniprot.org/uniprot/P25665 P25665]
−
{{#set: pathway associated=RUMP-PWY|GLYCOLYSIS|PWY-3801|PWY-7385|P124-PWY|ANAGLYCOLYSIS-PWY|PWY-5659|PWY-6981|P341-PWY|PWY-5384|PWY-7347|PWY66-399|SUCSYN-PWY|UDPNAGSYN-PWY|PWY-621|PWY-622|PWY-5054|PWY-6992|PWY-6142|GLUCONEO-PWY|PWY-7238|PWY-5514|P122-PWY}}
+
** [http://www.uniprot.org/uniprot/P45331 P45331]
 +
** [http://www.uniprot.org/uniprot/Q9PN94 Q9PN94]
 +
** [http://www.uniprot.org/uniprot/O26869 O26869]
 +
** [http://www.uniprot.org/uniprot/Q9JUT6 Q9JUT6]
 +
** [http://www.uniprot.org/uniprot/Q9CG55 Q9CG55]
 +
** [http://www.uniprot.org/uniprot/P05694 P05694]
 +
** [http://www.uniprot.org/uniprot/Q42699 Q42699]
 +
** [http://www.uniprot.org/uniprot/Q39586 Q39586]
 +
** [http://www.uniprot.org/uniprot/O48613 O48613]
 +
** [http://www.uniprot.org/uniprot/P93263 P93263]
 +
** [http://www.uniprot.org/uniprot/Q9UT19 Q9UT19]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase}}
 +
{{#set: common name=Methionine synthase}}
 +
{{#set: ec number=EC-2.1.1.14}}
 +
{{#set: gene associated=Ec-06_000970|Ec-28_003190}}
 +
{{#set: in pathway=PWY-702|HOMOSER-METSYN-PWY|PWY-6151|HSERMETANA-PWY|PWY-5041}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:31, 21 March 2018

Reaction HOMOCYSMET-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
    • Methionine synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 N5-methyl--tetrahydropteroyl tri-L-glutamate[c] + 1 L-homocysteine[c] <=> 1 tetrahydropteroyl tri-L-glutamate[c] + 1 L-methionine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-702, L-methionine biosynthesis II: PWY-702
    • 6 reactions found over 6 reactions in the full pathway
  • HOMOSER-METSYN-PWY, L-methionine biosynthesis I: HOMOSER-METSYN-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6151, S-adenosyl-L-methionine cycle I: PWY-6151
    • 3 reactions found over 6 reactions in the full pathway
  • HSERMETANA-PWY, L-methionine biosynthesis III: HSERMETANA-PWY
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5041, S-adenosyl-L-methionine cycle II: PWY-5041
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=HOMOCYSMET-RXN&oldid=27543"