Difference between revisions of "DUMP"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DUMP DUMP] == * smiles: ** C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2)) * inchi key: **...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Metabolite]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DUMP DUMP] ==
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* taxonomic range:
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* smiles:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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* inchi key:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** InChIKey=JSRLJPSBLDHEIO-SHYZEUOFSA-L
 
* common name:
 
* common name:
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** L-arginine degradation VI (arginase 2 pathway)
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** dUMP
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* molecular weight:
 +
** 306.168   
 
* Synonym(s):
 
* Synonym(s):
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** L-proline biosynthesis from arginine
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** U
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** deoxyurdine-phosphate
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** 2'-deoxyuridine 5-monophosphate
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** deoxyuridine-phosphate
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** 2'-deoxyuridine 5'-phosphate
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** 2'-deoxyuridylic acid
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** 2'-deoxy-5'-uridylic acid
  
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== Reaction(s) found ==
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== Reaction(s) known to consume the compound ==
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'''4''' reactions found over '''4''' reactions in the full pathway
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* [[THYMIDYLATESYN-RXN]]
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* [[ARGINASE-RXN]]
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== Reaction(s) known to produce the compound ==
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** 2 associated gene(s):
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* [[DUTP-PYROP-RXN]]
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*** [[Ec-10_001100]]
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* [[RXN-14199]]
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*** [[Ec-22_003700]]
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* [[DCMP-DEAMINASE-RXN]]
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** 2 reconstruction source(s) associated:
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== Reaction(s) of unknown directionality ==
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-14220]]
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*** [[orthology-aragem]]
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* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
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−
** 1 associated gene(s):
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*** [[Ec-21_003730]]
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−
** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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* [[PYRROLINECARBREDUCT-RXN]]
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−
** 5 associated gene(s):
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*** [[Ec-05_006410]]
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*** [[Ec-07_007350]]
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*** [[Ec-07_007360]]
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*** [[Ec-07_007340]]
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*** [[Ec-03_004680]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[SPONTPRO-RXN]]
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−
** 0 associated gene:
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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−
== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33090}}
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* CAS : 964-26-1
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{{#set: taxonomic range=TAX-1117}}
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* BIGG : 34762
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{{#set: taxonomic range=TAX-4751}}
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* PUBCHEM:
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{{#set: common name=L-arginine degradation VI (arginase 2 pathway)}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=18601100 18601100]
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{{#set: common name=L-proline biosynthesis from arginine}}
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* HMDB : HMDB01409
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{{#set: reaction found=4}}
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* LIGAND-CPD:
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{{#set: total reaction=4}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00365 C00365]
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{{#set: completion rate=100.0}}
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.18555972.html 18555972]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=246422 246422]
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* METABOLIGHTS : MTBLC246422
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{{#set: smiles=C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))}}
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{{#set: inchi key=InChIKey=JSRLJPSBLDHEIO-SHYZEUOFSA-L}}
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{{#set: common name=dUMP}}
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{{#set: molecular weight=306.168    }}
 +
{{#set: common name=U|deoxyurdine-phosphate|2'-deoxyuridine 5-monophosphate|deoxyuridine-phosphate|2'-deoxyuridine 5'-phosphate|2'-deoxyuridylic acid|2'-deoxy-5'-uridylic acid}}
 +
{{#set: consumed by=THYMIDYLATESYN-RXN}}
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{{#set: produced by=DUTP-PYROP-RXN|RXN-14199|DCMP-DEAMINASE-RXN}}
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{{#set: reversible reaction associated=RXN-14220}}

Latest revision as of 20:31, 21 March 2018

Metabolite DUMP

  • smiles:
    • C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))
  • inchi key:
    • InChIKey=JSRLJPSBLDHEIO-SHYZEUOFSA-L
  • common name:
    • dUMP
  • molecular weight:
    • 306.168
  • Synonym(s):
    • U
    • deoxyurdine-phosphate
    • 2'-deoxyuridine 5-monophosphate
    • deoxyuridine-phosphate
    • 2'-deoxyuridine 5'-phosphate
    • 2'-deoxyuridylic acid
    • 2'-deoxy-5'-uridylic acid

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 964-26-1
  • BIGG : 34762
  • PUBCHEM:
  • HMDB : HMDB01409
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC246422
"C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))" cannot be used as a page name in this wiki.




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