Difference between revisions of "DADPKIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16066 RXN-16066] == * direction: ** REVERSIBLE * common name: ** 1-acyl-sn-glycerol-3-phosphate...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DADPKIN-RXN DADPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16066 RXN-16066] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DADPKIN-RXN DADPKIN-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 1-acyl-sn-glycerol-3-phosphate acyltransferase
+
** nucleoside diphosphate kinase
 +
** Nucleoside diphosphate kinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.51 EC-2.3.1.51]
+
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Long-Chain-Acyl-CoAs]][c] '''+''' 1 [[ACYL-SN-GLYCEROL-3P]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[DADP]][c] '''=>''' 1 [[DATP]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a long-chain acyl-CoA[c] '''+''' 1 a 1-acyl-sn-glycerol 3-phosphate[c] '''<=>''' 1 coenzyme A[c] '''+''' 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c]
+
** 1 ATP[c] '''+''' 1 dADP[c] '''=>''' 1 dATP[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-21_003240]]
+
* Gene: [[Ec-11_005170]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: GO-TERM
−
* [[Ec-02_006160]]
+
* Gene: [[Ec-11_004330]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* [[Ec-26_001280]]
+
** Source: [[orthology-aragem]]
−
** ESILICULOSUS_GENOME
+
* Gene: [[Ec-07_000140]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[Ec-12_004670]]
+
*** Assignment: GO-TERM
−
** ESILICULOSUS_GENOME
+
* Gene: [[Ec-03_001380]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-22_003280]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-26_003930]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-04_001140]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7220]], adenosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7220 PWY-7220]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7224]], purine deoxyribonucleosides salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7224 PWY-7224]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7227]], adenosine deoxyribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7227 PWY-7227]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: common name=1-acyl-sn-glycerol-3-phosphate acyltransferase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27674 27674]
−
{{#set: ec number=EC-2.3.1.51}}
+
* LIGAND-RXN:
−
{{#set: gene associated=Ec-21_003240|Ec-02_006160|Ec-26_001280|Ec-12_004670}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01137 R01137]
−
{{#set: in pathway=}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: common name=nucleoside diphosphate kinase}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: common name=Nucleoside diphosphate kinase}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: ec number=EC-2.7.4.6}}
 +
{{#set: gene associated=Ec-11_005170|Ec-11_004330|Ec-07_000140|Ec-03_001380|Ec-22_003280|Ec-26_003930|Ec-04_001140}}
 +
{{#set: in pathway=PWY-7220|PWY-7224|PWY-7227}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:32, 21 March 2018

Reaction DADPKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • nucleoside diphosphate kinase
    • Nucleoside diphosphate kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 dADP[c] => 1 dATP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7220, adenosine deoxyribonucleotides de novo biosynthesis II: PWY-7220
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7224, purine deoxyribonucleosides salvage: PWY-7224
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7227, adenosine deoxyribonucleotides de novo biosynthesis: PWY-7227
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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