Difference between revisions of "DCMP-DEAMINASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATE-DEHYDROGENASE-NADP+-RXN PREPHENATE-DEHYDROGENASE-NADP+-RXN] == * direction: ** REVERSIBL...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DCMP-DEAMINASE-RXN DCMP-DEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enz...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATE-DEHYDROGENASE-NADP+-RXN PREPHENATE-DEHYDROGENASE-NADP+-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DCMP-DEAMINASE-RXN DCMP-DEAMINASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.1.13 EC-1.3.1.13]
+
** [http://enzyme.expasy.org/EC/3.5.4.12 EC-3.5.4.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PREPHENATE]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[P-HYDROXY-PHENYLPYRUVATE]][c]
+
** 1 [[DCMP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DUMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 prephenate[c] '''+''' 1 NADP+[c] '''<=>''' 1 NADPH[c] '''+''' 1 CO2[c] '''+''' 1 4-hydroxyphenylpyruvate[c]
+
** 1 dCMP[c] '''+''' 1 H2O[c] '''+''' 1 H+[c] '''=>''' 1 ammonium[c] '''+''' 1 dUMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-12_003010]]
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[gap-filling]]
+
* Category: [[orthology]]
−
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
** Source: [[orthology-aragem]]
−
*** Tool: [[meneco]]
+
*** Tool: [[pantograph]]
−
**** Comment: [[added for gapfilling]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22924 22924]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01730 R01730]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01663 R01663]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P20049 P20049]
+
** [http://www.uniprot.org/uniprot/P32321 P32321]
−
{{#set: direction=REVERSIBLE}}
+
** [http://www.uniprot.org/uniprot/P00814 P00814]
−
{{#set: ec number=EC-1.3.1.13}}
+
** [http://www.uniprot.org/uniprot/P16006 P16006]
−
{{#set: in pathway=}}
+
** [http://www.uniprot.org/uniprot/P06773 P06773]
−
{{#set: reconstruction category=gap-filling}}
+
** [http://www.uniprot.org/uniprot/O74069 O74069]
−
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: ec number=EC-3.5.4.12}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: gene associated=Ec-12_003010}}
 +
{{#set: in pathway=PWY-7210}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:32, 21 March 2018

Reaction DCMP-DEAMINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dCMP[c] + 1 H2O[c] + 1 H+[c] => 1 ammonium[c] + 1 dUMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7210, pyrimidine deoxyribonucleotides biosynthesis from CTP: PWY-7210
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




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