Difference between revisions of "RXN-13602"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10039 RXN-10039] == * direction: ** LEFT-TO-RIGHT * common name: ** O-phosphoseryl-tRNA(Sec) se...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13602 RXN-13602] == * direction: ** LEFT-TO-RIGHT * common name: ** linustatin β-diglucosi...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10039 RXN-10039] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13602 RXN-13602] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** O-phosphoseryl-tRNA(Sec) selenium transferase
+
** linustatin β-diglucosidase
 +
** Beta-glucosidase, family GH1
 +
** Beta-glucosidase, family GH3
 +
** Beta-glucosidase, family GH30
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.9.1.2 EC-2.9.1.2]
+
** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[O-phospho-L-seryl-tRNASecs]][c] '''+''' 1 [[SEPO3]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[Pi]][c] '''+''' 1 [[Charged-SEC-tRNAs]][c]
+
** 1 [[CPD-14594]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[LINAMARIN]][c] '''+''' 1 [[Glucopyranose]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an O-phospho-L-seryl-[tRNASec][c] '''+''' 1 selenophosphate[c] '''+''' 1 H2O[c] '''=>''' 2 phosphate[c] '''+''' 1 an L-selenocysteinyl-[tRNAsec][c]
+
** 1 linustatin[c] '''+''' 1 H2O[c] '''=>''' 1 linamarin[c] '''+''' 1 D-glucopyranose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-14_006440]]
+
* Gene: [[Ec-04_002190]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-07_005240]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-20_004800]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-07_001850]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-26_002410]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281]
+
* [[PWY-7091]], linustatin bioactivation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7091 PWY-7091]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R08224 R08224]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=O-phosphoseryl-tRNA(Sec) selenium transferase}}
+
{{#set: common name=linustatin β-diglucosidase}}
−
{{#set: ec number=EC-2.9.1.2}}
+
{{#set: common name=Beta-glucosidase, family GH1}}
−
{{#set: gene associated=Ec-14_006440}}
+
{{#set: common name=Beta-glucosidase, family GH3}}
−
{{#set: in pathway=PWY-6281}}
+
{{#set: common name=Beta-glucosidase, family GH30}}
 +
{{#set: ec number=EC-3.2.1.21}}
 +
{{#set: gene associated=Ec-04_002190|Ec-07_005240|Ec-20_004800|Ec-07_001850|Ec-26_002410}}
 +
{{#set: in pathway=PWY-7091}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:32, 21 March 2018

Reaction RXN-13602

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • linustatin β-diglucosidase
    • Beta-glucosidase, family GH1
    • Beta-glucosidase, family GH3
    • Beta-glucosidase, family GH30
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7091, linustatin bioactivation: PWY-7091
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-13602&oldid=27597"