Difference between revisions of "RXN-13602"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1415 PWY0-1415] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13602 RXN-13602] == * direction: ** LEFT-TO-RIGHT * common name: ** linustatin β-diglucosi...")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1415 PWY0-1415] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13602 RXN-13602] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** superpathway of heme biosynthesis from uroporphyrinogen-III
+
** linustatin β-diglucosidase
 +
** Beta-glucosidase, family GH1
 +
** Beta-glucosidase, family GH3
 +
** Beta-glucosidase, family GH30
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''5''' reactions found over '''6''' reactions in the full pathway
+
* With identifiers:
−
* [[HEMESYN2-PWY]]
+
** 1 [[CPD-14594]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[LINAMARIN]][c] '''+''' 1 [[Glucopyranose]][c]
−
** 0 associated gene:
+
* With common name(s):
−
* [[PROTOHEMEFERROCHELAT-RXN]]
+
** 1 linustatin[c] '''+''' 1 H2O[c] '''=>''' 1 linamarin[c] '''+''' 1 D-glucopyranose[c]
−
** 1 associated gene(s):
+
 
−
*** [[Ec-01_005360]]
+
== Genes associated with this reaction  ==
−
** 2 reconstruction source(s) associated:
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[annotation-esiliculosus_genome]]
+
* Gene: [[Ec-04_002190]]
−
*** [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[PROTOPORGENOXI-RXN]]
+
*** Assignment: EC-NUMBER
−
** 1 associated gene(s):
+
* Gene: [[Ec-07_005240]]
−
*** [[Ec-25_003100]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** 2 reconstruction source(s) associated:
+
*** Assignment: EC-NUMBER
−
*** [[annotation-esiliculosus_genome]]
+
* Gene: [[Ec-20_004800]]
−
*** [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[RXN0-1461]]
+
*** Assignment: EC-NUMBER
−
** 2 associated gene(s):
+
* Gene: [[Ec-07_001850]]
−
*** [[Ec-08_001470]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[Ec-19_005390]]
+
*** Assignment: EC-NUMBER
−
** 2 reconstruction source(s) associated:
+
* Gene: [[Ec-26_002410]]
−
*** [[annotation-esiliculosus_genome]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[orthology-aragem]]
+
*** Assignment: EC-NUMBER
−
* [[UROGENDECARBOX-RXN]]
+
== Pathways  ==
−
** 3 associated gene(s):
+
* [[PWY-7091]], linustatin bioactivation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7091 PWY-7091]
−
*** [[Ec-24_000620]]
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
*** [[Ec-01_000360]]
+
== Reconstruction information  ==
−
*** [[Ec-24_000650]]
+
* Category: [[annotation]]
−
** 1 reconstruction source(s) associated:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[annotation-esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
−
== Reaction(s) not found ==
+
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-1415 PWY0-1415]
+
{{#set: common name=linustatin β-diglucosidase}}
−
{{#set: taxonomic range=TAX-2}}
+
{{#set: common name=Beta-glucosidase, family GH1}}
−
{{#set: common name=superpathway of heme biosynthesis from uroporphyrinogen-III}}
+
{{#set: common name=Beta-glucosidase, family GH3}}
−
{{#set: reaction found=5}}
+
{{#set: common name=Beta-glucosidase, family GH30}}
−
{{#set: total reaction=6}}
+
{{#set: ec number=EC-3.2.1.21}}
−
{{#set: completion rate=83.0}}
+
{{#set: gene associated=Ec-04_002190|Ec-07_005240|Ec-20_004800|Ec-07_001850|Ec-26_002410}}
 +
{{#set: in pathway=PWY-7091}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:32, 21 March 2018

Reaction RXN-13602

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • linustatin β-diglucosidase
    • Beta-glucosidase, family GH1
    • Beta-glucosidase, family GH3
    • Beta-glucosidase, family GH30
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7091, linustatin bioactivation: PWY-7091
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-13602&oldid=27597"