Difference between revisions of "VALDEG-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10039 RXN-10039] == * direction: ** LEFT-TO-RIGHT * common name: ** O-phosphoseryl-tRNA(Sec) se...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TA...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10039 RXN-10039] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
 
* common name:
 
* common name:
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** O-phosphoseryl-tRNA(Sec) selenium transferase
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** L-valine degradation I
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* ec number:
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** [http://enzyme.expasy.org/EC/2.9.1.2 EC-2.9.1.2]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''8''' reactions found over '''8''' reactions in the full pathway
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** 1 [[O-phospho-L-seryl-tRNASecs]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[SEPO3]][c] '''=>''' 1 [[Charged-SEC-tRNAs]][c] '''+''' 2 [[Pi]][c]
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* [[1.2.1.25-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 an O-phospho-L-seryl-[tRNASec][c] '''+''' 1 H2O[c] '''+''' 1 selenophosphate[c] '''=>''' 1 an L-selenocysteinyl-[tRNAsec][c] '''+''' 2 phosphate[c]
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*** [[Ec-06_009010]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[2.6.1.22-RXN]]
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* [[Ec-14_006440]]
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** 0 associated gene:
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** ESILICULOSUS_GENOME
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** 1 reconstruction source(s) associated:
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***AUTOMATED-NAME-MATCH
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*** [[annotation-esiliculosus_genome]]
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== Pathways  ==
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* [[3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN]]
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* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281]
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** 2 associated gene(s):
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** [[Ec-14_006530]]
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== Reconstruction information  ==
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*** [[Ec-11_000140]]
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* [[annotation]]:
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** 2 reconstruction source(s) associated:
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** [[pathwaytools]]:
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*** [[annotation-esiliculosus_genome]]
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*** [[esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
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** 4 associated gene(s):
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*** [[Ec-12_005560]]
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*** [[Ec-12_005530]]
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*** [[Ec-12_005520]]
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*** [[Ec-20_001390]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[MEPROPCOA-FAD-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[METHYLACYLYLCOA-HYDROXY-RXN]]
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** 5 associated gene(s):
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*** [[Ec-16_001250]]
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*** [[Ec-14_006530]]
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*** [[Ec-17_000320]]
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*** [[Ec-06_001380]]
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*** [[Ec-16_003560]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RXN-11213]]
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** 2 associated gene(s):
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*** [[Ec-10_003810]]
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*** [[Ec-06_003440]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* ARACYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R08224 R08224]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: common name=O-phosphoseryl-tRNA(Sec) selenium transferase}}
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{{#set: taxonomic range=TAX-201174}}
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{{#set: ec number=EC-2.9.1.2}}
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{{#set: taxonomic range=TAX-1224}}
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{{#set: gene associated=Ec-14_006440}}
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{{#set: taxonomic range=TAX-1239}}
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{{#set: in pathway=PWY-6281}}
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{{#set: common name=L-valine degradation I}}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction found=8}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: total reaction=8}}
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{{#set: reconstruction source=esiliculosus_genome}}
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{{#set: completion rate=100.0}}

Latest revision as of 20:32, 21 March 2018

Pathway VALDEG-PWY

Reaction(s) found

8 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links





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