Difference between revisions of "RXN-13406"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URACIL-PRIBOSYLTRANS-RXN URACIL-PRIBOSYLTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13406 RXN-13406] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URACIL-PRIBOSYLTRANS-RXN URACIL-PRIBOSYLTRANS-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13406 RXN-13406] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Uracil phosphoribosyltransferase
 
 
* ec number:
 
* ec number:
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** [http://enzyme.expasy.org/EC/2.4.2.9 EC-2.4.2.9]
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** [http://enzyme.expasy.org/EC/2.1.1.162 EC-2.1.1.162]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[URACIL]][c] '''+''' 1 [[PRPP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[UMP]][c]
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** 3 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[GLY]][c] '''=>''' 3 [[PROTON]][c] '''+''' 3 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[BETAINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 uracil[c] '''+''' 1 5-phospho-α-D-ribose 1-diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 UMP[c]
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** 3 S-adenosyl-L-methionine[c] '''+''' 1 glycine[c] '''=>''' 3 H+[c] '''+''' 3 S-adenosyl-L-homocysteine[c] '''+''' 1 glycine betaine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* Gene: [[Ec-03_003570]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
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*** Assignment: EC-NUMBER
 
−
** Source: [[orthology-aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
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* [[PWY-7183]], pyrimidine nucleobases salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7183 PWY-7183]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
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* Category: [[gap-filling]]
−
** Source: [[orthology-aragem]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** Tool: [[pantograph]]
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*** Tool: [[meneco]]
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* Category: [[annotation]]
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**** Comment: [[added for gapfilling]]
−
** Source: [[annotation-esiliculosus_genome]]
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−
*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13017 13017]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32478 32478]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00966 R00966]
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−
* UNIPROT:
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** [http://www.uniprot.org/uniprot/P0A8F0 P0A8F0]
+
−
** [http://www.uniprot.org/uniprot/P39765 P39765]
+
−
** [http://www.uniprot.org/uniprot/Q9CEC9 Q9CEC9]
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** [http://www.uniprot.org/uniprot/P47276 P47276]
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** [http://www.uniprot.org/uniprot/O27186 O27186]
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** [http://www.uniprot.org/uniprot/P43857 P43857]
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** [http://www.uniprot.org/uniprot/O67914 O67914]
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** [http://www.uniprot.org/uniprot/P44722 P44722]
+
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** [http://www.uniprot.org/uniprot/Q9PN13 Q9PN13]
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** [http://www.uniprot.org/uniprot/P65941 P65941]
+
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** [http://www.uniprot.org/uniprot/P39149 P39149]
+
−
** [http://www.uniprot.org/uniprot/P18562 P18562]
+
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** [http://www.uniprot.org/uniprot/P41007 P41007]
+
−
** [http://www.uniprot.org/uniprot/P72753 P72753]
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** [http://www.uniprot.org/uniprot/Q55758 Q55758]
+
−
** [http://www.uniprot.org/uniprot/P93394 P93394]
+
−
** [http://www.uniprot.org/uniprot/O65583 O65583]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Uracil phosphoribosyltransferase}}
+
{{#set: ec number=EC-2.1.1.162}}
−
{{#set: ec number=EC-2.4.2.9}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=Ec-03_003570}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: in pathway=PWY-7183}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:32, 21 March 2018

Reaction RXN-13406

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

Reconstruction information

External links




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