Difference between revisions of "Ec-08 003030"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSNACMURPENTATRANS-RXN PHOSNACMURPENTATRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Gene == Gene Ec-08_003030 == * left end position: ** 2888268 * transcription direction: ** NEGATIVE * right end position: ** 2891445 * centisome position: ** 43.1...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSNACMURPENTATRANS-RXN PHOSNACMURPENTATRANS-RXN] ==
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== Gene Ec-08_003030 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2888268
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* common name:
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* transcription direction:
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** UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase
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** NEGATIVE
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** phospho-N-acetylmuramoyl-pentapeptide-transferase
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* right end position:
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* ec number:
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** 2891445
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** [http://enzyme.expasy.org/EC/2.7.8.13 EC-2.7.8.13]
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* centisome position:
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** 43.127365   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0281_0044
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** Esi0281_0044
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[IGPSYN-RXN]]
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** 1 [[CPD-9646]][c] '''+''' 1 [[C1]][c] '''=>''' 1 [[C5]][c] '''+''' 1 [[UMP]][c]
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* With common name(s):
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** 1 di-trans,octa-cis-undecaprenyl phosphate[c] '''+''' 1 UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] '''=>''' 1 undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] '''+''' 1 UMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-07_007020]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[PEPTIDOGLYCANSYN-PWY]], peptidoglycan biosynthesis I (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDOGLYCANSYN-PWY PEPTIDOGLYCANSYN-PWY]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[TRPSYN-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2888268}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28386 28386]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2891445}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05630 R05630]
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{{#set: centisome position=43.127365    }}
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* UNIPROT:
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{{#set: common name=Esi_0281_0044|Esi0281_0044}}
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** [http://www.uniprot.org/uniprot/Q55986 Q55986]
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{{#set: reaction associated=IGPSYN-RXN}}
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** [http://www.uniprot.org/uniprot/P45062 P45062]
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{{#set: pathway associated=TRPSYN-PWY}}
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** [http://www.uniprot.org/uniprot/Q03521 Q03521]
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** [http://www.uniprot.org/uniprot/O25235 O25235]
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** [http://www.uniprot.org/uniprot/Q9JSZ3 Q9JSZ3]
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** [http://www.uniprot.org/uniprot/Q9PI72 Q9PI72]
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** [http://www.uniprot.org/uniprot/P37585 P37585]
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** [http://www.uniprot.org/uniprot/P0A6W3 P0A6W3]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase}}
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{{#set: common name=phospho-N-acetylmuramoyl-pentapeptide-transferase}}
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{{#set: ec number=EC-2.7.8.13}}
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{{#set: gene associated=Ec-07_007020}}
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{{#set: in pathway=PEPTIDOGLYCANSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:33, 21 March 2018

Gene Ec-08_003030

  • left end position:
    • 2888268
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2891445
  • centisome position:
    • 43.127365
  • Synonym(s):
    • Esi_0281_0044
    • Esi0281_0044

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-08_003030&oldid=27714"