Difference between revisions of "2.8.1.6-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1-PHOSPHATIDYLINOSITOL-KINASE-RXN 1-PHOSPHATIDYLINOSITOL-KINASE-RXN] == * direction: ** LEFT-TO-RIG...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.8.1.6-RXN 2.8.1.6-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** biotin synthase * ec nu...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1-PHOSPHATIDYLINOSITOL-KINASE-RXN 1-PHOSPHATIDYLINOSITOL-KINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.8.1.6-RXN 2.8.1.6-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 1-phosphatidylinositol 4-kinase
+
** biotin synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.67 EC-2.7.1.67]
+
** [http://enzyme.expasy.org/EC/2.8.1.6 EC-2.8.1.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[L-1-phosphatidyl-inositols]][c] '''=>''' 1 [[CPD-1108]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''+''' 1 [[DETHIOBIOTIN]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[BIOTIN]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[CH33ADO]][c] '''+''' 2 [[MET]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 an L-1-phosphatidyl-inositol[c] '''=>''' 1 a 1-phosphatidyl-1D-myo-inositol 4-phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
+
** 1 a sulfurated [sulfur carrier][c] '''+''' 2 a reduced [2Fe-2S] ferredoxin[c] '''+''' 1 dethiobiotin[c] '''+''' 2 S-adenosyl-L-methionine[c] '''=>''' 1 biotin[c] '''+''' 2 an oxidized [2Fe-2S] ferredoxin[c] '''+''' 1 an unsulfurated [sulfur carrier][c] '''+''' 2 5'-deoxyadenosine[c] '''+''' 2 L-methionine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-06_009510]]
+
* Gene: [[Ec-24_000980]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6352]], 3-phosphoinositide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6352 PWY-6352]
+
* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351]
+
* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7380 PWY-7380]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 31: Line 31:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19877 19877]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22060 22060]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03361 R03361]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01078 R01078]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P18688 P18688]
+
** [http://www.uniprot.org/uniprot/Q9JRW7 Q9JRW7]
−
** [http://www.uniprot.org/uniprot/P12798 P12798]
+
** [http://www.uniprot.org/uniprot/Q9PLZ3 Q9PLZ3]
−
** [http://www.uniprot.org/uniprot/P39104 P39104]
+
** [http://www.uniprot.org/uniprot/P53557 P53557]
−
** [http://www.uniprot.org/uniprot/P42356 P42356]
+
** [http://www.uniprot.org/uniprot/O67104 O67104]
−
** [http://www.uniprot.org/uniprot/Q9UBF8 Q9UBF8]
+
** [http://www.uniprot.org/uniprot/P44987 P44987]
−
** [http://www.uniprot.org/uniprot/P37297 P37297]
+
** [http://www.uniprot.org/uniprot/Q58692 Q58692]
−
** [http://www.uniprot.org/uniprot/Q28925 Q28925]
+
** [http://www.uniprot.org/uniprot/P0A506 P0A506]
−
** [http://www.uniprot.org/uniprot/O81281 O81281]
+
** [http://www.uniprot.org/uniprot/Q9Z6L5 Q9Z6L5]
−
** [http://www.uniprot.org/uniprot/O81129 O81129]
+
** [http://www.uniprot.org/uniprot/Q9JUE3 Q9JUE3]
−
** [http://www.uniprot.org/uniprot/Q9ZPE1 Q9ZPE1]
+
** [http://www.uniprot.org/uniprot/P46396 P46396]
 +
** [http://www.uniprot.org/uniprot/Q47862 Q47862]
 +
** [http://www.uniprot.org/uniprot/P19206 P19206]
 +
** [http://www.uniprot.org/uniprot/P32451 P32451]
 +
** [http://www.uniprot.org/uniprot/P54967 P54967]
 +
** [http://www.uniprot.org/uniprot/P46715 P46715]
 +
** [http://www.uniprot.org/uniprot/P73538 P73538]
 +
** [http://www.uniprot.org/uniprot/P12996 P12996]
 +
** [http://www.uniprot.org/uniprot/O59778 O59778]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=1-phosphatidylinositol 4-kinase}}
+
{{#set: common name=biotin synthase}}
−
{{#set: ec number=EC-2.7.1.67}}
+
{{#set: ec number=EC-2.8.1.6}}
−
{{#set: gene associated=Ec-06_009510}}
+
{{#set: gene associated=Ec-24_000980}}
−
{{#set: in pathway=PWY-6352|PWY-6351}}
+
{{#set: in pathway=PWY0-1507|PWY-7380}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:33, 21 March 2018

Reaction 2.8.1.6-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • biotin synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1507, biotin biosynthesis from 8-amino-7-oxononanoate I: PWY0-1507
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7380, biotin biosynthesis from 8-amino-7-oxononanoate II: PWY-7380
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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