Difference between revisions of "FUCOKINASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8228 RXN-8228] == * direction: ** LEFT-TO-RIGHT * common name: ** delphinidin 3-O-glucoside 5-O...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FUCOKINASE-RXN FUCOKINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** L-fucokinase * ec...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8228 RXN-8228] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FUCOKINASE-RXN FUCOKINASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** delphinidin 3-O-glucoside 5-O-glucosyltransferase
+
** L-fucokinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1.298 EC-2.4.1.298]
+
** [http://enzyme.expasy.org/EC/2.7.1.52 EC-2.7.1.52]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-7117]][c] '''+''' 1 [[CPD-12575]][c] '''=>''' 1 [[CPD-7139]][c] '''+''' 1 [[UDP]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[L-Fucopyranoses]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[CPD-488]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 delphinidin-3-O-β-D-glucoside[c] '''+''' 1 UDP-α-D-glucose[c] '''=>''' 1 delphinidin 3,5-di-O-β-D-glucoside[c] '''+''' 1 UDP[c]
+
** 1 ATP[c] '''+''' 1 L-fucopyranose[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 β-L-fucose 1-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-28_003310]]
+
* Gene: [[Ec-12_008200]]
−
** [[pantograph]]-[[aragem]]
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** Source: [[annotation-esiliculosus_genome]]
−
* [[Ec-04_004610]]
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*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-14_000870]]
+
−
** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5307]], gentiodelphin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5307 PWY-5307]
+
* [[PWY-6]], GDP-L-fucose biosynthesis II (from L-fucose): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6 PWY-6]
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13241 13241]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03161 R03161]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P11553 P11553]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=delphinidin 3-O-glucoside 5-O-glucosyltransferase}}
+
{{#set: common name=L-fucokinase}}
−
{{#set: ec number=EC-2.4.1.298}}
+
{{#set: ec number=EC-2.7.1.52}}
−
{{#set: gene associated=Ec-28_003310|Ec-04_004610|Ec-14_000870}}
+
{{#set: gene associated=Ec-12_008200}}
−
{{#set: in pathway=PWY-5307}}
+
{{#set: in pathway=PWY-6}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=orthology-aragem}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:33, 21 March 2018

Reaction FUCOKINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • L-fucokinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 L-fucopyranose[c] => 1 H+[c] + 1 ADP[c] + 1 β-L-fucose 1-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6, GDP-L-fucose biosynthesis II (from L-fucose): PWY-6
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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