Difference between revisions of "RXN-13616"

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(Created page with "Category:Gene == Gene Ec-07_007310 == * left end position: ** 7043482 * transcription direction: ** POSITIVE * right end position: ** 7049208 * centisome position: ** 91.2...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13616 RXN-13616] == * direction: ** LEFT-TO-RIGHT * common name: ** enoyl-Coenzyme A hydratase/...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-07_007310 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13616 RXN-13616] ==
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* left end position:
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* direction:
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** 7043482
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
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* right end position:
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** ClpP/crotonase-like domain
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** 7049208
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** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
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* centisome position:
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* ec number:
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** 91.20810   
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0305_0004
 
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** Esi0305_0004
 
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** SDH2
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-14971]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[T2-DECENOYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-2244]][c]
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***ec-number
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* With common name(s):
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* [[RXN-15378]]
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** 1 trans-dec-2-enoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (S)-3-hydroxydecanoyl-CoA[c]
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** esiliculosus_genome
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***ec-number
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== Genes associated with this reaction  ==
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* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** esiliculosus_genome
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* Gene: [[Ec-06_001380]]
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***ec-number
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** Source: [[annotation-esiliculosus_genome]]
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== Pathways associated ==
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*** Assignment: EC-NUMBER
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* [[PWY-561]]
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* Gene: [[Ec-16_003560]]
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* [[PWY-4302]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-3781]]
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*** Assignment: EC-NUMBER
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* [[PWY0-1353]]
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* Gene: [[Ec-16_001250]]
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* [[PWY-7279]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[P105-PWY]]
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*** Assignment: EC-NUMBER
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* [[PWY-6969]]
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* Gene: [[Ec-14_006530]]
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* [[PWY-6728]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY0-1329]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PWY-7254]]
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== Pathways  ==
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* [[PWY-5690]]
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* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
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* [[PWY66-398]]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[TCA]]
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=7043482}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31193 31193]
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{{#set: right end position=7049208}}
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* LIGAND-RXN:
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{{#set: centisome position=91.20810    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R04744 R04744]
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{{#set: common name=Esi_0305_0004|Esi0305_0004|SDH2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=RXN-14971|RXN-15378|SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN}}
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{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
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{{#set: pathway associated=PWY-561|PWY-4302|PWY-3781|PWY0-1353|PWY-7279|P105-PWY|PWY-6969|PWY-6728|PWY0-1329|PWY-7254|PWY-5690|PWY66-398|TCA}}
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{{#set: common name=ClpP/crotonase-like domain}}
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{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: gene associated=Ec-06_001380|Ec-16_003560|Ec-16_001250|Ec-14_006530}}
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{{#set: in pathway=PWY-7094}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:33, 21 March 2018

Reaction RXN-13616

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
    • ClpP/crotonase-like domain
    • Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 trans-dec-2-enoyl-CoA[c] + 1 H2O[c] => 1 (S)-3-hydroxydecanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7094, fatty acid salvage: PWY-7094
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-13616&oldid=27762"