Difference between revisions of "RXN-8036"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13616 RXN-13616] == * direction: ** LEFT-TO-RIGHT * common name: ** enoyl-Coenzyme A hydratase/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8036 RXN-8036] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-glucosidase, family GH1...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13616 RXN-13616] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8036 RXN-8036] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
+
** Beta-glucosidase, family GH1
−
** ClpP/crotonase-like domain
+
** Beta-glucosidase, family GH3
−
** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
+
** Beta-glucosidase, family GH30
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
+
** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[T2-DECENOYL-COA]][c] '''=>''' 1 [[CPD0-2244]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CPD-7417]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[CPD-7418]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 trans-dec-2-enoyl-CoA[c] '''=>''' 1 (S)-3-hydroxydecanoyl-CoA[c]
+
** 1 H2O[c] '''+''' 1 cis-coumarinic acid-β-D-glucoside[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 coumarinate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-16_001250]]
+
* Gene: [[Ec-07_001850]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Ec-16_003560]]
+
* Gene: [[Ec-07_005240]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Ec-06_001380]]
+
** Source: [[orthology-aragem]]
−
** ESILICULOSUS_GENOME
+
* Gene: [[Ec-20_004800]]
−
***EC-NUMBER
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[Ec-14_006530]]
+
*** Assignment: EC-NUMBER
−
** ESILICULOSUS_GENOME
+
** Source: [[orthology-aragem]]
−
***AUTOMATED-NAME-MATCH
+
* Gene: [[Ec-26_002410]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-04_002190]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
+
* [[PWY-5176]], coumarin biosynthesis (via 2-coumarate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5176 PWY-5176]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-aragem]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31193 31193]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31223 31223]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04744 R04744]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04998 R04998]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
+
{{#set: common name=Beta-glucosidase, family GH1}}
−
{{#set: common name=ClpP/crotonase-like domain}}
+
{{#set: common name=Beta-glucosidase, family GH3}}
−
{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
+
{{#set: common name=Beta-glucosidase, family GH30}}
−
{{#set: ec number=EC-4.2.1.17}}
+
{{#set: ec number=EC-3.2.1.21}}
−
{{#set: gene associated=Ec-16_001250|Ec-16_003560|Ec-06_001380|Ec-14_006530}}
+
{{#set: gene associated=Ec-07_001850|Ec-07_005240|Ec-20_004800|Ec-26_002410|Ec-04_002190}}
−
{{#set: in pathway=PWY-7094}}
+
{{#set: in pathway=PWY-5176}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:34, 21 March 2018

Reaction RXN-8036

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Beta-glucosidase, family GH1
    • Beta-glucosidase, family GH3
    • Beta-glucosidase, family GH30
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 cis-coumarinic acid-β-D-glucoside[c] => 1 D-glucopyranose[c] + 1 coumarinate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5176, coumarin biosynthesis (via 2-coumarate): PWY-5176
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links






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