Difference between revisions of "RXN-22"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12270 RXN-12270] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycosyl hydrolase, family...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-22 RXN-22] == * direction: ** LEFT-TO-RIGHT * common name: ** Argininosuccinate lyase * ec numb...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12270 RXN-12270] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-22 RXN-22] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Glycosyl hydrolase, family 88
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** Argininosuccinate lyase
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/3.2.1.179 EC-3.2.1.179]
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** [http://enzyme.expasy.org/EC/4.3.2.1 EC-4.3.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[WATER]][c] '''+''' 1 [[CPD-13187]][c] '''=>''' 1 [[CPD-13122]][c] '''+''' 1 [[CPD-13188]][c]
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** 1 [[CANAVANINOSUCCINATE]][c] '''=>''' 1 [[FUM]][c] '''+''' 1 [[CANAVANINE]][c]
 
* With common name(s):
 
* With common name(s):
** 1 H2O[c] '''+''' 1 unsaturated gellan tetrasaccharide[c] '''=>''' 1 4-deoxy-L-threo-hex-4-enopyranuronate[c] '''+''' 1 β-D-Glcp-(1→4)-α-L-Rhap-(1→3)-β-D-Glcp[c]
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** 1 canavaninosuccinate[c] '''=>''' 1 fumarate[c] '''+''' 1 L-canavanine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Ec-02_002970]]
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* Gene: [[Ec-12_005890]]
** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
***AUTOMATED-NAME-MATCH
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*** Assignment: EC-NUMBER
* [[Ec-02_002980]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-6827]], gellan degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6827 PWY-6827]
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* [[PWY-5]], canavanine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5 PWY-5]
** '''1''' reactions found over '''2''' reactions in the full pathway
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** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31638 31638]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R09831 R09831]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Glycosyl hydrolase, family 88}}
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{{#set: common name=Argininosuccinate lyase}}
{{#set: ec number=EC-3.2.1.179}}
+
{{#set: ec number=EC-4.3.2.1}}
{{#set: gene associated=Ec-02_002970|Ec-02_002980}}
+
{{#set: gene associated=Ec-12_005890}}
{{#set: in pathway=PWY-6827}}
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{{#set: in pathway=PWY-5}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:34, 21 March 2018

Reaction RXN-22

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Argininosuccinate lyase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5, canavanine biosynthesis: PWY-5
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links