Difference between revisions of "PYFLAVOXRE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTEPADENYLYLTRAN-RXN PANTEPADENYLYLTRAN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [ht...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYFLAVOXRE-RXN PYFLAVOXRE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Transketolase, C-...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTEPADENYLYLTRAN-RXN PANTEPADENYLYLTRAN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYFLAVOXRE-RXN PYFLAVOXRE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.7.3 EC-2.7.7.3]
+
** [http://enzyme.expasy.org/EC/1.2.7.1 EC-1.2.7.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PANTETHEINE-P]][c] '''=>''' 1 [[DEPHOSPHO-COA]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[PYRUVATE]][c] '''+''' 1 [[Oxidized-flavodoxins]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Reduced-flavodoxins]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 H+[c] '''+''' 1 4'-phosphopantetheine[c] '''=>''' 1 3'-dephospho-CoA[c] '''+''' 1 diphosphate[c]
+
** 1 pyruvate[c] '''+''' 1 an oxidized flavodoxin[c] '''+''' 1 H+[c] '''+''' 1 coenzyme A[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 CO2[c] '''+''' 1 a reduced flavodoxin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-23_002710]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-18_003420]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-15_004230]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[COA-PWY-1]], coenzyme A biosynthesis II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY-1 COA-PWY-1]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[COA-PWY]], coenzyme A biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY COA-PWY]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[gap-filling]]
+
* Category: [[annotation]]
−
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[meneco]]
+
*** Tool: [[pathwaytools]]
−
**** Comment: [[added for gapfilling]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19801 19801]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03035 R03035]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.7.7.3}}
+
{{#set: common name=Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II}}
−
{{#set: in pathway=COA-PWY-1|COA-PWY}}
+
{{#set: ec number=EC-1.2.7.1}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: gene associated=Ec-23_002710|Ec-18_003420|Ec-15_004230}}
−
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:35, 21 March 2018

Reaction PYFLAVOXRE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PYFLAVOXRE-RXN&oldid=27935"