Difference between revisions of "Ec-04 004690"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.145-RXN 2.4.1.145-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Alpha-1,3-mannosyl-...")
(Created page with "Category:Gene == Gene Ec-04_004690 == * left end position: ** 4710646 * transcription direction: ** POSITIVE * right end position: ** 4727401 * centisome position: ** 72.3...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.145-RXN 2.4.1.145-RXN] ==
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== Gene Ec-04_004690 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4710646
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* common name:
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* transcription direction:
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** Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, family GT54
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.4.1.145 EC-2.4.1.145]
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** 4727401
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* centisome position:
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** 72.339584   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0037_0140
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** Esi0037_0140
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEROXID-RXN]]
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** 1 [[2-2-N-linked-Glycan]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[24-2-N-linked-Glycan]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 N4-{N-acetyl-β-D-glucosaminyl-(1,2)-α-D-mannosyl-(1,3)-[N-acetyl-β-D-glucosaminyl-(1,2)-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1,4)-N-acetyl-β-D-glucosaminyl-(1,4)-N-acetyl-β-D-glucosaminyl}-protein-L-asparagine[c] '''+''' 1 UDP-N-acetyl-α-D-glucosamine[c] '''=>''' 1 UDP[c] '''+''' 1 [(2,4),(2)]-N-linked glycan[c] '''+''' 1 H+[c]
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* Reaction: [[RXN-11329]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-14240]]
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* [[Ec-07_006930]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***EC-NUMBER
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* Reaction: [[RXN-15288]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-7426]], mannosyl-glycoprotein N-acetylglucosaminyltransferases: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7426 PWY-7426]
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*** Assignment: go-term
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* Reaction: [[RXN-17352]]
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== Reconstruction information  ==
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** Source: [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
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*** Assignment: go-term
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* Reaction: [[RXN-8635]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-7214]]
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* [[PWY-6824]]
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* [[PWY-7445]]
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* [[PWY-5469]]
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* [[PWY-5466]]
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* [[PWY-5461]]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: left end position=4710646}}
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** [http://www.uniprot.org/uniprot/P23336 P23336]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=4727401}}
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{{#set: common name=Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, family GT54}}
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{{#set: centisome position=72.339584    }}
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{{#set: ec number=EC-2.4.1.145}}
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{{#set: common name=Esi_0037_0140|Esi0037_0140}}
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{{#set: gene associated=Ec-07_006930}}
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{{#set: reaction associated=PEROXID-RXN|RXN-11329|RXN-14240|RXN-15288|RXN-17352|RXN-8635}}
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{{#set: in pathway=PWY-7426}}
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{{#set: pathway associated=PWY-7214|PWY-6824|PWY-7445|PWY-5469|PWY-5466|PWY-5461}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:35, 21 March 2018

Gene Ec-04_004690

  • left end position:
    • 4710646
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4727401
  • centisome position:
    • 72.339584
  • Synonym(s):
    • Esi_0037_0140
    • Esi0037_0140

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-04_004690&oldid=27944"