Difference between revisions of "CPD-564"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-564 CPD-564] == * smiles: ** C(CC([N+])C(=O)[O-])SCC1(OC(O)C(O)C(O)1) * inchi key: ** InChI...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-564 CPD-564] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(CC([N+])C(=O)[O-])SCC1(OC(O)C(O)C(O)1)
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* inchi key:
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** InChIKey=IQFWYNFDWRYSRA-OEQWSMLSSA-N
 
* common name:
 
* common name:
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** DALR anticodon binding
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** S-ribosyl-L-homocysteine
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** Arginyl-tRNA Synthetase
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* molecular weight:
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* ec number:
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** 267.296   
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** [http://enzyme.expasy.org/EC/6.1.1.19 EC-6.1.1.19]
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* Synonym(s):
 
* Synonym(s):
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** S-Ribosylhomocysteine
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** Ribose-5-S-homocysteine
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** S-D-ribosyl-L-homocysteine
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** ribose-5-S-homocysteine
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** S-ribosylhomocysteine
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** S-(5-deoxy-D-ribos-5-yl)-L-homocysteine
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[PROTON]][c] '''+''' 1 [[ARG]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[ARG-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-ARG-tRNAs]][c] '''+''' 1 [[AMP]][c]
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* [[ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H+[c] '''+''' 1 L-arginine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAarg[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-arginyl-[tRNAarg][c] '''+''' 1 AMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-01_003640]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-03_001410]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 37558-16-0
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20301 20301]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245776 25245776]
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** [http://www.genome.jp/dbget-bin/www_bget?R03646 R03646]
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* CHEBI:
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* UNIPROT:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17575 17575]
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** [http://www.uniprot.org/uniprot/P40329 P40329]
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* BIGG : 42044
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** [http://www.uniprot.org/uniprot/P35868 P35868]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P43832 P43832]
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** [http://www.genome.jp/dbget-bin/www_bget?C03539 C03539]
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** [http://www.uniprot.org/uniprot/O51540 O51540]
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{{#set: smiles=C(CC([N+])C(=O)[O-])SCC1(OC(O)C(O)C(O)1)}}
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** [http://www.uniprot.org/uniprot/O67068 O67068]
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{{#set: inchi key=InChIKey=IQFWYNFDWRYSRA-OEQWSMLSSA-N}}
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** [http://www.uniprot.org/uniprot/O59147 O59147]
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{{#set: common name=S-ribosyl-L-homocysteine}}
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** [http://www.uniprot.org/uniprot/O83803 O83803]
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{{#set: molecular weight=267.296    }}
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** [http://www.uniprot.org/uniprot/Q9ZE81 Q9ZE81]
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{{#set: common name=S-Ribosylhomocysteine|Ribose-5-S-homocysteine|S-D-ribosyl-L-homocysteine|ribose-5-S-homocysteine|S-ribosylhomocysteine|S-(5-deoxy-D-ribos-5-yl)-L-homocysteine}}
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** [http://www.uniprot.org/uniprot/Q9PNC0 Q9PNC0]
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{{#set: produced by=ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9X0H8 Q9X0H8]
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** [http://www.uniprot.org/uniprot/P46906 P46906]
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** [http://www.uniprot.org/uniprot/Q57689 Q57689]
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** [http://www.uniprot.org/uniprot/O27496 O27496]
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** [http://www.uniprot.org/uniprot/Q9JTM7 Q9JTM7]
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** [http://www.uniprot.org/uniprot/Q9CE12 Q9CE12]
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** [http://www.uniprot.org/uniprot/P56128 P56128]
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** [http://www.uniprot.org/uniprot/P47618 P47618]
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** [http://www.uniprot.org/uniprot/Q9ZMB9 Q9ZMB9]
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** [http://www.uniprot.org/uniprot/Q08888 Q08888]
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** [http://www.uniprot.org/uniprot/P54136 P54136]
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** [http://www.uniprot.org/uniprot/P38714 P38714]
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** [http://www.uniprot.org/uniprot/Q05506 Q05506]
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** [http://www.uniprot.org/uniprot/P75222 P75222]
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** [http://www.uniprot.org/uniprot/P11875 P11875]
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** [http://www.uniprot.org/uniprot/O23247 O23247]
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** [http://www.uniprot.org/uniprot/O74781 O74781]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=DALR anticodon binding}}
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{{#set: common name=Arginyl-tRNA Synthetase}}
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{{#set: ec number=EC-6.1.1.19}}
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{{#set: gene associated=Ec-01_003640|Ec-03_001410}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:35, 21 March 2018

Metabolite CPD-564

  • smiles:
    • C(CC([N+])C(=O)[O-])SCC1(OC(O)C(O)C(O)1)
  • inchi key:
    • InChIKey=IQFWYNFDWRYSRA-OEQWSMLSSA-N
  • common name:
    • S-ribosyl-L-homocysteine
  • molecular weight:
    • 267.296
  • Synonym(s):
    • S-Ribosylhomocysteine
    • Ribose-5-S-homocysteine
    • S-D-ribosyl-L-homocysteine
    • ribose-5-S-homocysteine
    • S-ribosylhomocysteine
    • S-(5-deoxy-D-ribos-5-yl)-L-homocysteine

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(CC([N+])C(=O)[O-])SCC1(OC(O)C(O)C(O)1)" cannot be used as a page name in this wiki.



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