Difference between revisions of "RXN-16165"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.127-RXN 2.7.1.127-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** inositol-1,4,5-tris...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16165 RXN-16165] == * direction: ** LEFT-TO-RIGHT * common name: ** Methionyl-tRNA synthetase *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.127-RXN 2.7.1.127-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16165 RXN-16165] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** inositol-1,4,5-trisphosphate 3-kinase
+
** Methionyl-tRNA synthetase
 +
** Nucleic acid-binding, OB-fold
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.127 EC-2.7.1.127]
+
** [http://enzyme.expasy.org/EC/6.1.1.10 EC-6.1.1.10]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[INOSITOL-1-4-5-TRISPHOSPHATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[CPD-506]][c]
+
** 1 [[MET]][c] '''+''' 1 [[Initiation-tRNAmet]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[L-methionyl-tRNAfmet]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-myo-inositol (1,4,5)-trisphosphate[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 D-myo-inositol (1,3,4,5)-tetrakisphosphate[c]
+
** 1 L-methionine[c] '''+''' 1 initiator tRNAmet[c] '''+''' 1 H+[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-methionyl-[initiator tRNAmet][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-16_003350]]
+
* Gene: [[Ec-16_002540]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-18_004570]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6364]], D-myo-inositol (1,3,4)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6364 PWY-6364]
+
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
−
* [[PWY-6362]], 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6362 PWY-6362]
+
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-6361]], 1D-myo-inositol hexakisphosphate biosynthesis I  (from Ins(1,4,5)P3): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6361 PWY-6361]
+
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11020 11020]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03433 R03433]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P23677 P23677]
 
−
** [http://www.uniprot.org/uniprot/P17105 P17105]
 
−
** [http://www.uniprot.org/uniprot/P42335 P42335]
 
−
** [http://www.uniprot.org/uniprot/O45049 O45049]
 
−
** [http://www.uniprot.org/uniprot/O45050 O45050]
 
−
** [http://www.uniprot.org/uniprot/O45051 O45051]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=inositol-1,4,5-trisphosphate 3-kinase}}
+
{{#set: common name=Methionyl-tRNA synthetase}}
−
{{#set: ec number=EC-2.7.1.127}}
+
{{#set: common name=Nucleic acid-binding, OB-fold}}
−
{{#set: gene associated=Ec-16_003350}}
+
{{#set: ec number=EC-6.1.1.10}}
−
{{#set: in pathway=PWY-6364|PWY-6362|PWY-6361}}
+
{{#set: gene associated=Ec-16_002540|Ec-18_004570}}
 +
{{#set: in pathway=TRNA-CHARGING-PWY}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:35, 21 March 2018

Reaction RXN-16165

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Methionyl-tRNA synthetase
    • Nucleic acid-binding, OB-fold
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-methionine[c] + 1 initiator tRNAmet[c] + 1 H+[c] + 1 ATP[c] => 1 AMP[c] + 1 diphosphate[c] + 1 an L-methionyl-[initiator tRNAmet][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-16165&oldid=27988"