Difference between revisions of "PWY0-1535"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-ISOPROPYLMALATESYN-RXN 2-ISOPROPYLMALATESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1535 PWY0-1535] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-ISOPROPYLMALATESYN-RXN 2-ISOPROPYLMALATESYN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1535 PWY0-1535] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** 2-Isopropylmalate synthase
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** D-serine degradation
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.3.13 EC-2.3.3.13]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''3''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c] '''+''' 1 [[CO-A]][c]
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* [[RXN-15124]]
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* With common name(s):
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** 0 associated gene:
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** 1 H2O[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 H+[c] '''+''' 1 (2S)-2-isopropylmalate[c] '''+''' 1 coenzyme A[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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* [[RXN-15127]]
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Genes have been associated with this reaction based on different elements listed below.
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** 0 associated gene:
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* [[Ec-28_002630]]
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** 1 reconstruction source(s) associated:
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** ESILICULOSUS_GENOME
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*** [[annotation-esiliculosus_genome]]
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***EC-NUMBER
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== Reaction(s) not found ==
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* [[Ec-18_000460]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15581 RXN-15581]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21524 21524]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-1535 PWY0-1535]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01213 R01213]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=D-serine degradation}}
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** [http://www.uniprot.org/uniprot/P06208 P06208]
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/Q58595 Q58595]
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{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/P09151 P09151]
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{{#set: completion rate=67.0}}
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** [http://www.uniprot.org/uniprot/Q9PLV9 Q9PLV9]
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** [http://www.uniprot.org/uniprot/Q9JUK6 Q9JUK6]
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** [http://www.uniprot.org/uniprot/Q58787 Q58787]
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** [http://www.uniprot.org/uniprot/P94565 P94565]
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** [http://www.uniprot.org/uniprot/Q9JP75 Q9JP75]
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** [http://www.uniprot.org/uniprot/Q02141 Q02141]
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** [http://www.uniprot.org/uniprot/P48575 P48575]
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** [http://www.uniprot.org/uniprot/O86511 O86511]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=2-Isopropylmalate synthase}}
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{{#set: ec number=EC-2.3.3.13}}
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{{#set: gene associated=Ec-28_002630|Ec-18_000460}}
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{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:35, 21 March 2018

Pathway PWY0-1535

  • taxonomic range:
  • common name:
    • D-serine degradation
  • Synonym(s):

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY0-1535&oldid=27993"