Difference between revisions of "PWY-5136"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11109 RXN-11109] == * direction: ** LEFT-TO-RIGHT * common name: ** RNA helicase family protein...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11109 RXN-11109] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
** RNA helicase family protein
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** fatty acid β-oxidation II (peroxisome)
** Probable RNA helicase SDE3
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* ec number:
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** [http://enzyme.expasy.org/EC/3.6.4.13 EC-3.6.4.13]
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* Synonym(s):
 
* Synonym(s):
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** fatty acid β-oxidation II (plants)
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''4''' reactions found over '''5''' reactions in the full pathway
** 1 [[WATER]][c] '''+''' 1 [[Wound-RNA]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Unwound-RNA]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
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* [[ACYLCOASYN-RXN]]
* With common name(s):
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** 4 associated gene(s):
** 1 H2O[c] '''+''' 1 wound RNA[c] '''+''' 1 ATP[c] '''=>''' 1 an unwound RNA[c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
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*** [[Ec-03_003710]]
 
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*** [[Ec-01_001560]]
== Genes associated with this reaction  ==
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*** [[Ec-12_008720]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-02_006430]]
* [[Ec-12_002420]]
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** 1 reconstruction source(s) associated:
** ESILICULOSUS_GENOME
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*** [[annotation-esiliculosus_genome]]
***AUTOMATED-NAME-MATCH
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* [[ENOYL-COA-HYDRAT-RXN]]
* [[Ec-07_001080]]
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** 4 associated gene(s):
** ESILICULOSUS_GENOME
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*** [[Ec-14_006530]]
***AUTOMATED-NAME-MATCH
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*** [[Ec-06_001380]]
== Pathways  ==
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*** [[Ec-16_003560]]
== Reconstruction information  ==
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*** [[Ec-16_001250]]
* Category: [[annotation]]
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** 1 reconstruction source(s) associated:
** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
*** Tool: [[pathwaytools]]
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* [[OHACYL-COA-DEHYDROG-RXN]]
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** 2 associated gene(s):
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*** [[Ec-14_006530]]
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*** [[Ec-19_005290]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-11026]]
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** 3 associated gene(s):
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*** [[Ec-22_002920]]
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*** [[Ec-08_006390]]
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*** [[Ec-26_004320]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=KETOACYLCOATHIOL-RXN KETOACYLCOATHIOL-RXN]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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* METACYC:
{{#set: common name=RNA helicase family protein}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=PWY-5136 PWY-5136]
{{#set: common name=Probable RNA helicase SDE3}}
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* ARACYC:
{{#set: ec number=EC-3.6.4.13}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5136 PWY-5136]
{{#set: gene associated=Ec-12_002420|Ec-07_001080}}
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{{#set: taxonomic range=TAX-33090}}
{{#set: in pathway=}}
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{{#set: common name=fatty acid β-oxidation II (peroxisome)}}
{{#set: reconstruction category=annotation}}
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{{#set: common name=fatty acid β-oxidation II (plants)}}
{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reaction found=4}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: total reaction=5}}
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{{#set: completion rate=80.0}}

Latest revision as of 20:35, 21 March 2018

Pathway PWY-5136

  • taxonomic range:
  • common name:
    • fatty acid β-oxidation II (peroxisome)
  • Synonym(s):
    • fatty acid β-oxidation II (plants)

Reaction(s) found

4 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links