Difference between revisions of "Ec-16 004700"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
(Created page with "Category:Gene == Gene Ec-16_004700 == * left end position: ** 4801309 * transcription direction: ** POSITIVE * right end position: ** 4805578 * centisome position: ** 89.9...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] ==
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== Gene Ec-16_004700 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4801309
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* common name:
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* transcription direction:
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** DALR anticodon binding
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** POSITIVE
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** Arginyl-tRNA Synthetase
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* right end position:
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* ec number:
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** 4805578
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** [http://enzyme.expasy.org/EC/6.1.1.19 EC-6.1.1.19]
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* centisome position:
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** 89.95167   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0164_0059
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** Esi0164_0059
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CARBODEHYDRAT-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[ARG-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[ARG]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-ARG-tRNAs]][c]
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* With common name(s):
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** 1 H+[c] '''+''' 1 a tRNAarg[c] '''+''' 1 ATP[c] '''+''' 1 L-arginine[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-arginyl-[tRNAarg][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-01_003640]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-03_001410]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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*** Assignment: go-term
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== Pathways  ==
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* Reaction: [[RXN0-5224]]
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-241]]
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* [[PWYQT-4429]]
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* [[PWY-7117]]
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* [[PWY-7115]]
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* [[PWY-6142]]
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* [[CYANCAT-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4801309}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20301 20301]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4805578}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03646 R03646]
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{{#set: centisome position=89.95167    }}
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* UNIPROT:
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{{#set: common name=Esi_0164_0059|Esi0164_0059}}
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** [http://www.uniprot.org/uniprot/P40329 P40329]
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{{#set: reaction associated=CARBODEHYDRAT-RXN|RXN0-5224}}
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** [http://www.uniprot.org/uniprot/P35868 P35868]
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{{#set: pathway associated=PWY-241|PWYQT-4429|PWY-7117|PWY-7115|PWY-6142|CYANCAT-PWY}}
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** [http://www.uniprot.org/uniprot/P43832 P43832]
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** [http://www.uniprot.org/uniprot/O51540 O51540]
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** [http://www.uniprot.org/uniprot/O67068 O67068]
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** [http://www.uniprot.org/uniprot/O59147 O59147]
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** [http://www.uniprot.org/uniprot/O83803 O83803]
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** [http://www.uniprot.org/uniprot/Q9ZE81 Q9ZE81]
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** [http://www.uniprot.org/uniprot/Q9PNC0 Q9PNC0]
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** [http://www.uniprot.org/uniprot/Q9X0H8 Q9X0H8]
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** [http://www.uniprot.org/uniprot/P46906 P46906]
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** [http://www.uniprot.org/uniprot/Q57689 Q57689]
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** [http://www.uniprot.org/uniprot/O27496 O27496]
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** [http://www.uniprot.org/uniprot/Q9JTM7 Q9JTM7]
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** [http://www.uniprot.org/uniprot/Q9CE12 Q9CE12]
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** [http://www.uniprot.org/uniprot/P56128 P56128]
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** [http://www.uniprot.org/uniprot/P47618 P47618]
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** [http://www.uniprot.org/uniprot/Q9ZMB9 Q9ZMB9]
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** [http://www.uniprot.org/uniprot/Q08888 Q08888]
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** [http://www.uniprot.org/uniprot/P54136 P54136]
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** [http://www.uniprot.org/uniprot/P38714 P38714]
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** [http://www.uniprot.org/uniprot/Q05506 Q05506]
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** [http://www.uniprot.org/uniprot/P75222 P75222]
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** [http://www.uniprot.org/uniprot/P11875 P11875]
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** [http://www.uniprot.org/uniprot/O23247 O23247]
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** [http://www.uniprot.org/uniprot/O74781 O74781]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=DALR anticodon binding}}
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{{#set: common name=Arginyl-tRNA Synthetase}}
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{{#set: ec number=EC-6.1.1.19}}
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{{#set: gene associated=Ec-01_003640|Ec-03_001410}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:35, 21 March 2018

Gene Ec-16_004700

  • left end position:
    • 4801309
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4805578
  • centisome position:
    • 89.95167
  • Synonym(s):
    • Esi_0164_0059
    • Esi0164_0059

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-16_004700&oldid=28023"