Difference between revisions of "Ec-26 003630"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAPHTHOATE-SYN-RXN NAPHTHOATE-SYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** naphthoat...")
(Created page with "Category:Gene == Gene Ec-26_003630 == * left end position: ** 3952477 * transcription direction: ** POSITIVE * right end position: ** 3961876 * centisome position: ** 60.0...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAPHTHOATE-SYN-RXN NAPHTHOATE-SYN-RXN] ==
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== Gene Ec-26_003630 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3952477
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* common name:
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* transcription direction:
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** naphthoate synthase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.1.3.36 EC-4.1.3.36]
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** 3961876
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* centisome position:
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** 60.037495   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0197_0023
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** Esi0197_0023
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ARYL-SULFOTRANSFERASE-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[CPD-6972]][c] '''=>''' 1 [[CPD-9925]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H+[c] '''+''' 1 4-(2'-carboxyphenyl)-4-oxobutyryl-CoA[c] '''=>''' 1 1,4-dihydroxy-2-naphthoyl-CoA[c] '''+''' 1 H2O[c]
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* Reaction: [[RXN-10614]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-10615]]
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* [[Ec-24_003920]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-10777]]
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** [[pantograph]]-[[aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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== Pathways  ==
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*** Assignment: ec-number
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* [[PWY-5837]], 1,4-dihydroxy-2-naphthoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5837 PWY-5837]
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* Reaction: [[RXN-10782]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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** Source: [[annotation-esiliculosus_genome]]
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== Reconstruction information  ==
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*** Assignment: ec-number
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* Category: [[orthology]]
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* Reaction: [[RXN-11058]]
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** Source: [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pantograph]]
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*** Assignment: ec-number
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* Category: [[annotation]]
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* Reaction: [[RXN-11059]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-15587]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-15588]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-15589]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN6666-9]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY6666-2]]
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* [[PWY-6261]]
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* [[PWY-6313]]
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* [[PWY-6398]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3952477}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26562 26562]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3961876}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07263 R07263]
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{{#set: centisome position=60.037495    }}
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* UNIPROT:
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{{#set: common name=Esi_0197_0023|Esi0197_0023}}
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** [http://www.uniprot.org/uniprot/Q9CHK2 Q9CHK2]
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{{#set: reaction associated=ARYL-SULFOTRANSFERASE-RXN|RXN-10614|RXN-10615|RXN-10777|RXN-10782|RXN-11058|RXN-11059|RXN-15587|RXN-15588|RXN-15589|RXN6666-9}}
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** [http://www.uniprot.org/uniprot/P44960 P44960]
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{{#set: pathway associated=PWY6666-2|PWY-6261|PWY-6313|PWY-6398}}
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** [http://www.uniprot.org/uniprot/P0ABU0 P0ABU0]
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** [http://www.uniprot.org/uniprot/P23966 P23966]
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** [http://www.uniprot.org/uniprot/Q59464 Q59464]
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** [http://www.uniprot.org/uniprot/P73495 P73495]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=naphthoate synthase}}
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{{#set: ec number=EC-4.1.3.36}}
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{{#set: gene associated=Ec-24_003920}}
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{{#set: in pathway=PWY-5837}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:35, 21 March 2018

Gene Ec-26_003630

  • left end position:
    • 3952477
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3961876
  • centisome position:
    • 60.037495
  • Synonym(s):
    • Esi_0197_0023
    • Esi0197_0023

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-26_003630&oldid=28039"