Difference between revisions of "Ec-14 004550"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPREDUCT-RXN UDPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribonucleoside-diph...")
 
(Created page with "Category:Gene == Gene Ec-14_004550 == * left end position: ** 4279361 * transcription direction: ** POSITIVE * right end position: ** 4284093 * centisome position: ** 65.2...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPREDUCT-RXN UDPREDUCT-RXN] ==
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== Gene Ec-14_004550 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4279361
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* common name:
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* transcription direction:
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** Ribonucleoside-diphosphate reductase small chain
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** POSITIVE
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** ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
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* right end position:
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** EsV-1-128
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** 4284093
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** EsV-1-180
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* centisome position:
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* ec number:
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** 65.229904   
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** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0189_0001
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** Esi0189_0001
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[STRICTOSIDINE-SYNTHASE-RXN]]
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** 1 [[UDP]][c] '''+''' 1 [[Red-Thioredoxin]][c] '''=>''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[DUDP]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 UDP[c] '''+''' 1 a reduced thioredoxin[c] '''=>''' 1 an oxidized thioredoxin[c] '''+''' 1 dUDP[c] '''+''' 1 H2O[c]
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== Pathways associated ==
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* [[PWY-5290]]
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== Genes associated with this reaction  ==
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* [[PWY-6326]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-06_005120]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-19_000440]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-21_002920]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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** [[pantograph]]-[[aragem]]
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* [[Ec-17_003700]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-11_002180]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-06_005570]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-11_002170]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways ==
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* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
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** '''14''' reactions found over '''17''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4279361}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28026 28026]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4284093}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02018 R02018]
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{{#set: centisome position=65.229904    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0189_0001|Esi0189_0001}}
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{{#set: common name=Ribonucleoside-diphosphate reductase small chain}}
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{{#set: reaction associated=STRICTOSIDINE-SYNTHASE-RXN}}
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{{#set: common name=ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor}}
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{{#set: pathway associated=PWY-5290|PWY-6326}}
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{{#set: common name=EsV-1-128}}
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{{#set: common name=EsV-1-180}}
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{{#set: ec number=EC-1.17.4.1}}
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{{#set: gene associated=Ec-06_005120|Ec-19_000440|Ec-21_002920|Ec-17_003700|Ec-11_002180|Ec-06_005570|Ec-11_002170}}
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{{#set: in pathway=PWY-7184|PWY-6545|PWY0-166}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:36, 21 March 2018

Gene Ec-14_004550

  • left end position:
    • 4279361
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4284093
  • centisome position:
    • 65.229904
  • Synonym(s):
    • Esi_0189_0001
    • Esi0189_0001

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-14_004550&oldid=28086"