Difference between revisions of "CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-Co...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN] == * direction: ** LEFT-...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** acyl-CoA dehydrogenase
+
** S-adenosyl-L-methionine-dependent methyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
+
** [http://enzyme.expasy.org/EC/2.1.1.104 EC-2.1.1.104]
 
* Synonym(s):
 
* Synonym(s):
−
** fatty acyl coenzyme A dehydrogenase
 
−
** acyl coenzyme A dehydrogenase
 
−
** fatty-acyl-CoA dehydrogenase
 
−
** general acyl CoA dehydrogenase
 
−
** medium-chain acyl-coenzyme A dehydrogenase
 
−
** long-chain acyl coenzyme A dehydrogenase
 
−
** long-chain acyl-CoA dehydrogenase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ETF-Oxidized]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[TRANS-D2-ENOYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c]
+
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CAFFEOYL-COA]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[FERULOYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 H+[c] '''=>''' 1 a trans-2-enoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
+
** 1 S-adenosyl-L-methionine[c] '''+''' 1 trans-caffeoyl-CoA[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 feruloyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-06_008910]]
+
* Gene: [[Ec-28_003750]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: EC-NUMBER
−
* [[Ec-16_004260]]
+
** Source: [[orthology-aragem]]
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-08_006390]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-03_003490]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-14_001600]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-21_001100]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
+
* [[PWY-6792]], scopoletin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6792 PWY-6792]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
 +
** '''6''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-5710]], capsaicin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5710 PWY-5710]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7498]], phenylpropanoids methylation (ice plant): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7498 PWY-7498]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6039]], chlorogenic acid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6039 PWY-6039]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7398]], coumarins biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398]
 +
** '''3''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
 +
** '''7''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-aragem]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16925 16925]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01942 R01942]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P16219 P16219]
+
** [http://www.uniprot.org/uniprot/P28034 P28034]
−
** [http://www.uniprot.org/uniprot/P45952 P45952]
+
** [http://www.uniprot.org/uniprot/O65307 O65307]
−
** [http://www.uniprot.org/uniprot/P15651 P15651]
+
** [http://www.uniprot.org/uniprot/Q42945 Q42945]
−
** [http://www.uniprot.org/uniprot/P11310 P11310]
+
** [http://www.uniprot.org/uniprot/O24144 O24144]
−
** [http://www.uniprot.org/uniprot/P08503 P08503]
+
** [http://www.uniprot.org/uniprot/O24149 O24149]
−
** [http://www.uniprot.org/uniprot/Q07417 Q07417]
+
** [http://www.uniprot.org/uniprot/O24150 O24150]
−
** [http://www.uniprot.org/uniprot/Q54857 Q54857]
+
** [http://www.uniprot.org/uniprot/O24151 O24151]
−
** [http://www.uniprot.org/uniprot/P45867 P45867]
+
** [http://www.uniprot.org/uniprot/O04899 O04899]
−
** [http://www.uniprot.org/uniprot/Q9X3R3 Q9X3R3]
+
** [http://www.uniprot.org/uniprot/O49499 O49499]
−
** [http://www.uniprot.org/uniprot/Q9R9I6 Q9R9I6]
+
** [http://www.uniprot.org/uniprot/Q9SVI7 Q9SVI7]
−
** [http://www.uniprot.org/uniprot/Q96329 Q96329]
+
** [http://www.uniprot.org/uniprot/Q40313 Q40313]
 +
** [http://www.uniprot.org/uniprot/Q43095 Q43095]
 +
** [http://www.uniprot.org/uniprot/O04854 O04854]
 +
** [http://www.uniprot.org/uniprot/O65162 O65162]
 +
** [http://www.uniprot.org/uniprot/O65362 O65362]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=acyl-CoA dehydrogenase}}
+
{{#set: common name=S-adenosyl-L-methionine-dependent methyltransferase}}
−
{{#set: ec number=EC-1.3.8}}
+
{{#set: ec number=EC-2.1.1.104}}
−
{{#set: common name=fatty acyl coenzyme A dehydrogenase|acyl coenzyme A dehydrogenase|fatty-acyl-CoA dehydrogenase|general acyl CoA dehydrogenase|medium-chain acyl-coenzyme A dehydrogenase|long-chain acyl coenzyme A dehydrogenase|long-chain acyl-CoA dehydrogenase}}
+
{{#set: gene associated=Ec-28_003750}}
−
{{#set: gene associated=Ec-06_008910|Ec-16_004260|Ec-08_006390|Ec-03_003490|Ec-14_001600|Ec-21_001100}}
+
{{#set: in pathway=PWY-6792|PWY-1121|PWY-5710|PWY-7498|PWY-6039|PWY-7398|PWY-361}}
−
{{#set: in pathway=FAO-PWY}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 20:36, 21 March 2018

Reaction CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • S-adenosyl-L-methionine-dependent methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6792, scopoletin biosynthesis: PWY-6792
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 6 reactions found over 19 reactions in the full pathway
  • PWY-5710, capsaicin biosynthesis: PWY-5710
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7498, phenylpropanoids methylation (ice plant): PWY-7498
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6039, chlorogenic acid biosynthesis I: PWY-6039
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-7398, coumarins biosynthesis (engineered): PWY-7398
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-361, phenylpropanoid biosynthesis: PWY-361
    • 7 reactions found over 15 reactions in the full pathway

Reconstruction information

External links





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