Difference between revisions of "GLY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-Co...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLY GLY] == * smiles: ** C([N+])C([O-])=O * inchi key: ** InChIKey=DHMQDGOQFOQNFH-UHFFFAOYSA-N...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLY GLY] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C([N+])C([O-])=O
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* inchi key:
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** InChIKey=DHMQDGOQFOQNFH-UHFFFAOYSA-N
 
* common name:
 
* common name:
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** acyl-CoA dehydrogenase
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** glycine
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
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** 75.067   
 
* Synonym(s):
 
* Synonym(s):
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** fatty acyl coenzyme A dehydrogenase
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** G
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** acyl coenzyme A dehydrogenase
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** aminoacetic acid
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** fatty-acyl-CoA dehydrogenase
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** gly
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** general acyl CoA dehydrogenase
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** medium-chain acyl-coenzyme A dehydrogenase
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** long-chain acyl coenzyme A dehydrogenase
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** long-chain acyl-CoA dehydrogenase
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[biomass_rxn]]
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** 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ETF-Oxidized]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c]
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* [[RXN-10821]]
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* With common name(s):
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* [[GLYRIBONUCSYN-RXN]]
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** 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 H+[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 a trans-2-enoyl-CoA[c]
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* [[GLUTATHIONE-SYN-RXN]]
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* [[RXN-13406]]
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== Genes associated with this reaction  ==
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* [[GLYCINE--TRNA-LIGASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) known to produce the compound ==
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* Gene: [[Ec-06_008910]]
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* [[RXN-6622]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[2.3.2.15-RXN]]
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*** Assignment: GO-TERM
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* [[RXN-13677]]
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* Gene: [[Ec-14_001600]]
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* [[RXN-9896]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[THREONINE-ALDOLASE-RXN]]
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*** Assignment: GO-TERM
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* [[RXN-6642]]
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* Gene: [[Ec-08_006390]]
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* [[RXN0-5234]]
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** Source: [[annotation-esiliculosus_genome]]
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== Reaction(s) of unknown directionality ==
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*** Assignment: GO-TERM
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* [[ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]]
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* Gene: [[Ec-21_001100]]
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* [[GCVMULTI-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[GCVMULTI-RXN-GLY/THF/NAD//METHYLENE-THF/AMMONIUM/CARBON-DIOXIDE/NADH.56.]]
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*** Assignment: GO-TERM
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* [[GLYOHMETRANS-RXN-SER/THF//GLY/METHYLENE-THF/WATER.33.]]
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* Gene: [[Ec-16_004260]]
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* [[GCVP-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[GLYOHMETRANS-RXN]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-03_003490]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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* CAS : 56-40-6
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** [http://www.uniprot.org/uniprot/P16219 P16219]
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* BIGG : 33610
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** [http://www.uniprot.org/uniprot/P45952 P45952]
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* DRUGBANK : DB00145
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** [http://www.uniprot.org/uniprot/P15651 P15651]
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/P11310 P11310]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5257127 5257127]
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** [http://www.uniprot.org/uniprot/P08503 P08503]
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* KNAPSACK : C00001361
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** [http://www.uniprot.org/uniprot/Q07417 Q07417]
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* HMDB : HMDB00123
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** [http://www.uniprot.org/uniprot/Q54857 Q54857]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P45867 P45867]
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** [http://www.genome.jp/dbget-bin/www_bget?C00037 C00037]
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** [http://www.uniprot.org/uniprot/Q9X3R3 Q9X3R3]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/Q9R9I6 Q9R9I6]
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** [http://www.chemspider.com/Chemical-Structure.730.html 730]
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** [http://www.uniprot.org/uniprot/Q96329 Q96329]
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* CHEBI:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15428 15428]
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{{#set: common name=acyl-CoA dehydrogenase}}
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* METABOLIGHTS : MTBLC15428
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{{#set: ec number=EC-1.3.8}}
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{{#set: smiles=C([N+])C([O-])=O}}
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{{#set: common name=fatty acyl coenzyme A dehydrogenase|acyl coenzyme A dehydrogenase|fatty-acyl-CoA dehydrogenase|general acyl CoA dehydrogenase|medium-chain acyl-coenzyme A dehydrogenase|long-chain acyl coenzyme A dehydrogenase|long-chain acyl-CoA dehydrogenase}}
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{{#set: inchi key=InChIKey=DHMQDGOQFOQNFH-UHFFFAOYSA-N}}
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{{#set: gene associated=Ec-06_008910|Ec-14_001600|Ec-08_006390|Ec-21_001100|Ec-16_004260|Ec-03_003490}}
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{{#set: common name=glycine}}
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{{#set: in pathway=FAO-PWY}}
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{{#set: molecular weight=75.067    }}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=G|aminoacetic acid|gly}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: consumed by=biomass_rxn|RXN-10821|GLYRIBONUCSYN-RXN|GLUTATHIONE-SYN-RXN|RXN-13406|GLYCINE--TRNA-LIGASE-RXN}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: produced by=RXN-6622|2.3.2.15-RXN|RXN-13677|RXN-9896|THREONINE-ALDOLASE-RXN|RXN-6642|RXN0-5234}}
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{{#set: reversible reaction associated=ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN|GCVMULTI-RXN|GCVMULTI-RXN-GLY/THF/NAD//METHYLENE-THF/AMMONIUM/CARBON-DIOXIDE/NADH.56.|GLYOHMETRANS-RXN-SER/THF//GLY/METHYLENE-THF/WATER.33.|GCVP-RXN|GLYOHMETRANS-RXN}}

Latest revision as of 19:36, 21 March 2018

Metabolite GLY

  • smiles:
    • C([N+])C([O-])=O
  • inchi key:
    • InChIKey=DHMQDGOQFOQNFH-UHFFFAOYSA-N
  • common name:
    • glycine
  • molecular weight:
    • 75.067
  • Synonym(s):
    • G
    • aminoacetic acid
    • gly

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 56-40-6
  • BIGG : 33610
  • DRUGBANK : DB00145
  • PUBCHEM:
  • KNAPSACK : C00001361
  • HMDB : HMDB00123
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC15428
"C([N+])C([O-])=O" cannot be used as a page name in this wiki.




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