Difference between revisions of "RXN-15122"

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(Created page with "Category:Gene == Gene Ec-18_001570 == * left end position: ** 1535836 * transcription direction: ** NEGATIVE * right end position: ** 1541203 * centisome position: ** 31.1...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] == * direction: ** LEFT-TO-RIGHT * common name: ** Tryptophan synthase beta su...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-18_001570 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] ==
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* left end position:
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* direction:
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** 1535836
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** Tryptophan synthase beta subunit-like PLP-dependent enzyme
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* right end position:
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** L-threonine ammonia-lyase
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** 1541203
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* centisome position:
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** 31.174633   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0199_0012
 
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** Esi0199_0012
 
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** PSP
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[4-NITROPHENYLPHOSPHATASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[THR]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-15056]][c]
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***go-term
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* With common name(s):
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* [[PSERPHOSPHA-RXN]]
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** 1 L-threonine[c] '''=>''' 1 H2O[c] '''+''' 1 H+[c] '''+''' 1 (2Z)-2-aminobut-2-enoate[c]
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** esiliculosus_genome
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***ec-number
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== Genes associated with this reaction  ==
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* [[RXN0-5114]]
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Genes have been associated with this reaction based on different elements listed below.
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** esiliculosus_genome
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* Gene: [[Ec-06_007490]]
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***ec-number
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** Source: [[annotation-esiliculosus_genome]]
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** [[pantograph]]-[[aragem]]
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*** Assignment: EC-NUMBER
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== Pathways associated ==
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* Gene: [[Ec-03_001910]]
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* [[SERSYN-PWY]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5826]], hypoglycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5826 PWY-5826]
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** '''4''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-5437]], L-threonine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=1535836}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=Tryptophan synthase beta subunit-like PLP-dependent enzyme}}
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{{#set: right end position=1541203}}
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{{#set: common name=L-threonine ammonia-lyase}}
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{{#set: centisome position=31.174633    }}
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{{#set: gene associated=Ec-06_007490|Ec-03_001910}}
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{{#set: common name=Esi_0199_0012|Esi0199_0012|PSP}}
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{{#set: in pathway=ILEUSYN-PWY|PWY-5826|PWY-5437}}
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{{#set: reaction associated=4-NITROPHENYLPHOSPHATASE-RXN|PSERPHOSPHA-RXN|RXN0-5114}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=SERSYN-PWY}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:37, 21 March 2018

Reaction RXN-15122

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Tryptophan synthase beta subunit-like PLP-dependent enzyme
    • L-threonine ammonia-lyase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-threonine[c] => 1 H2O[c] + 1 H+[c] + 1 (2Z)-2-aminobut-2-enoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine): ILEUSYN-PWY
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-5826, hypoglycin biosynthesis: PWY-5826
    • 4 reactions found over 14 reactions in the full pathway
  • PWY-5437, L-threonine degradation I: PWY-5437
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-15122&oldid=28191"