Difference between revisions of "Ec-22 000860"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN] == * direction: ** LEFT-...")
 
(Created page with "Category:Gene == Gene Ec-22_000860 == * left end position: ** 999973 * transcription direction: ** POSITIVE * right end position: ** 1006566 * centisome position: ** 22.14...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN] ==
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== Gene Ec-22_000860 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 999973
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* common name:
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* transcription direction:
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** S-adenosyl-L-methionine-dependent methyltransferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.1.1.104 EC-2.1.1.104]
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** 1006566
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* centisome position:
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** 22.143623   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0065_0096
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** Esi0065_0096
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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** 1 [[CAFFEOYL-COA]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[FERULOYL-COA]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 trans-caffeoyl-CoA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 feruloyl-CoA[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-28_003750]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-6792]], scopoletin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6792 PWY-6792]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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** '''6''' reactions found over '''19''' reactions in the full pathway
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* [[PWY-5710]], capsaicin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5710 PWY-5710]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7498]], phenylpropanoids methylation (ice plant): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7498 PWY-7498]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6039]], chlorogenic acid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6039 PWY-6039]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7398]], coumarins biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398]
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** '''3''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
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** '''7''' reactions found over '''15''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=999973}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16925 16925]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=1006566}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01942 R01942]
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{{#set: centisome position=22.143623    }}
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* UNIPROT:
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{{#set: common name=Esi_0065_0096|Esi0065_0096}}
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** [http://www.uniprot.org/uniprot/P28034 P28034]
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
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** [http://www.uniprot.org/uniprot/O65307 O65307]
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** [http://www.uniprot.org/uniprot/Q42945 Q42945]
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** [http://www.uniprot.org/uniprot/O24144 O24144]
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** [http://www.uniprot.org/uniprot/O24149 O24149]
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** [http://www.uniprot.org/uniprot/O24150 O24150]
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** [http://www.uniprot.org/uniprot/O24151 O24151]
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** [http://www.uniprot.org/uniprot/O04899 O04899]
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** [http://www.uniprot.org/uniprot/O49499 O49499]
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** [http://www.uniprot.org/uniprot/Q9SVI7 Q9SVI7]
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** [http://www.uniprot.org/uniprot/Q40313 Q40313]
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** [http://www.uniprot.org/uniprot/Q43095 Q43095]
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** [http://www.uniprot.org/uniprot/O04854 O04854]
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** [http://www.uniprot.org/uniprot/O65162 O65162]
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** [http://www.uniprot.org/uniprot/O65362 O65362]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=S-adenosyl-L-methionine-dependent methyltransferase}}
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{{#set: ec number=EC-2.1.1.104}}
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{{#set: gene associated=Ec-28_003750}}
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{{#set: in pathway=PWY-6792|PWY-1121|PWY-5710|PWY-7498|PWY-6039|PWY-7398|PWY-361}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:37, 21 March 2018

Gene Ec-22_000860

  • left end position:
    • 999973
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1006566
  • centisome position:
    • 22.143623
  • Synonym(s):
    • Esi_0065_0096
    • Esi0065_0096

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-22_000860&oldid=28192"